Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq183 145 2e-29 seq176 87.8 4e-12 >seq183 Length=3359036 Score = 145 bits (160), Expect = 2e-29 Identities = 173/231 (75%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| ||| ||||| ||||| || || |||| Sbjct 618941 CCACCACGGAGACGGAGCACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGAC 618882 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || ||||| ||||| || |||||||| || || ||| Sbjct 618881 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGG---TCGGGG 618825 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| || ||||| || || || ||| |||||||| || || | ||||| ||||| Sbjct 618824 GGAATTCCCTCCTTATCTTGAATCTT-GCTCTTCACGTTGTCGATGGTGTCGCTAGATTC 618766 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | |||||| ||||| ||||| || ||||||||||| || ||||| Sbjct 618765 AACTTCCAACGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 618715 Score = 114 bits (126), Expect = 3e-20 Identities = 167/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||||| || || || || | |||||| || || || || || ||||| | Sbjct 619170 TCCACCACGGAGTCGGAGAACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGA 619111 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||||||||| ||||| || | || || ||||| |||||||||||||| || || Sbjct 619110 GAGCGTGCGCCCGTCCTCAAGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGG 619051 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATC---GCTCGATT 288421 ||| || || || || || || || ||| || ||||| || || | || |||| | Sbjct 619050 GATACCCTCCTTGTCTTGAATCTT-GCTCTTGACGTTGTCGATCGTGTCCGAGCTC---T 618995 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | ||||| ||||| || || || |||||||| || |||||||| Sbjct 618994 CGACCTCCAATGTGATTGTCTTGCCAGTGAGCGTCTTGACAAAGATCTGCAT 618943 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 288275 TCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTC 288334 || ||| | | || ||||| || |||||| || ||||| || || || | || || | Sbjct 1361901 TCCTGCATACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTAC 1361960 Query 288335 CTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTT 288394 | |||||||| |||||||| || ||||| || || || |||||||| || | | Sbjct 1361961 CAGCGAAGATAAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 1362020 Query 288395 TCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAG 288454 | ||||| || || | |||||||| || || ||||| || || ||||| || ||||| | Sbjct 1362021 TGACGTTGTCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGG 1362080 Query 288455 TCTTGACGAA 288464 |||||||||| Sbjct 1362081 TCTTGACGAA 1362090 >seq176 Length=1444596 Score = 87.8 bits (96), Expect = 4e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 269155 GGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG 269214 |||||||| ||| | || ||| || || ||||| ||||||||||| ||| |||| | Sbjct 727939 GGTATGAACGCCAACCTGATGTGCCAGTACATCGAGTTCGTGGCTGACCGTCTCTTGGTG 727880 Query 269215 GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATT 269274 || ||||| | ||| | ||| | | || ||||||| ||| ||||| || Sbjct 727879 GCCCTCGGCAACTCGAAGTACTTCAACGCCACCAACCCCTTCGACTTCATGGAGTCGATC 727820 Query 269275 TCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCTGG 269333 || || | |||||||| ||||||||||| |||||||| | ||||| || | | || || Sbjct 727819 TCCCTGGCTGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCC-GG 727761 Query 269334 TGTAATG 269340 ||| ||| Sbjct 727760 TGTGATG 727754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650787677042