Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq176 93.3 9e-14 seq191 89.7 1e-12 >seq176 Length=1444596 Score = 93.3 bits (102), Expect = 9e-14 Identities = 301/461 (65%), Gaps = 10/461 (2%) Strand=Plus/Minus Query 243298 CGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATC 243357 ||||||||||||| | |||||| ||||| | || ||||| |||| | |||| Sbjct 728209 CGTCTCGTCGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGATCTTTCGCCTCCATT 728150 Query 243358 TTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGT 243417 || |||||| ||| || |||||||||| ||| | | || |||||| | || | Sbjct 728149 TTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATTTCT 728090 Query 243418 CGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTA-TGTATTCAAAGCTCCAGAACAA 243476 || |||||||| || ||| | |||| |||| | | || | ||| ||||| Sbjct 728089 CGTGACGAGGGTCTCCACACTGACTTCGCCT-GCTTGCTCTTCTCTCACCTC---AACAA 728034 Query 243477 GCTACCATTCGAAACGGTCA---AACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGA 243533 | || | | ||| | | ||||| || || || | | || ||||| Sbjct 728033 CCGCCCCAGCAAGCAGGTTGTGGAGGACATCATTGTCGAGGCTGTCGCTATTGAGAAGGA 727974 Query 243534 ATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACA 243593 ||| | |||||| |||| ||| ||| | || |||||| | | || ||| | || Sbjct 727973 GTTCTTGACCGACGCCCTTCCCTGCGCCCTTCTGGGTATGAACGCCAACCTGATGTGCCA 727914 Query 243594 GTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAA 243653 ||||||||| ||||| || ||||| | || | || || || | ||| | ||| Sbjct 727913 GTACATCGAGTTCGTGGCTGACCGTCTCTTGGTGGCCCTCGGCAACTCGAAGTACTTCAA 727854 Query 243654 CTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTT 243713 | ||| |||||||| | ||| |||||| || || || || || || |||||||| Sbjct 727853 CGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCCCTGGCTGGAAAGACCAACTTCTT 727794 Query 243714 CGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753 ||| |||||||| |||| || || | | || ||||||||| Sbjct 727793 CGAGAAGCGTGTTGGTGACTACCAGAAGGCC-GGTGTGATG 727754 >seq191 Length=1646026 Score = 89.7 bits (98), Expect = 1e-12 Identities = 237/360 (66%), Gaps = 9/360 (3%) Strand=Plus/Plus Query 333637 TGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGG 333696 ||||||| | |||| ||||| ||||||||| | | | || | ||| |||| Sbjct 24153 TGATACCAGCCAGGATACCGGGAGGGGGGAACTTGAAGGAGACCTGGGAGGCGGACAGGG 24212 Query 333697 CGTAGTAACTCGCTGATTCGGGACGCTT---CTTCACGAACTCGGACAGATTTCCCTTGT 333753 |||||||||| | ||||| ||| ||| ||||| |||| ||| || ||||||| Sbjct 24213 TGTAGTAACTCTTGGCCTCGGG---CTTGACCTTGACGAAGTCGGCCAGGTTACCCTTGT 24269 Query 333754 ACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGA 333813 | ||||| | | |||||| ||| || ||||| || ||||||||| Sbjct 24270 AGCAGACGAGCTTCTTGCT---TTCGTAGTGGTAGATGTCCGTGCACACCTCGTCGAGGA 24326 Query 333814 ACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAA 333873 | ||||||||||| || |||| || | | ||| | | || | |||||||| Sbjct 24327 AGCCGGAGTCGTGACTGACGATCAAGCTGGTGATGTCGGTGTGCTTCTTGAGGTATTCCT 24386 Query 333874 TCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCT 333933 || |||| | ||||| | ||| | |||||| || || ||||| || || || | | Sbjct 24387 GCAACCACTTGACGTTGGCGACATCCAAATGGTTAGTAGGTTCGTCCAGCAGGAGGACGT 24446 Query 333934 TTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAGAG 333993 || |||| | ||| || || || || || || ||||| ||||| || || || |||| Sbjct 24447 CGGCCTTCATCAACATGGCGCGGGCCAGCGCCAGCTTCATCTTCCAACCACCAGACAGAG 24506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102876622774650