Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq183 140 3e-28 >seq183 Length=3359036 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| || || ||||| || ||||||||||| | | |||||| ||||| Sbjct 618926 AGCACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGGGTGCGGCCGTCT 618867 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| ||||| ||||||| |||||||||||||| |||||||| || || ||| Sbjct 618866 TCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTATCT 618807 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | | || ||||| | || | |||| Sbjct 618806 TGAATCTTGCTCTTCACGTTGTCGATGGTGTCGCTAGATTCAACTTCCAACGTGATGGTC 618747 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || ||||| |||||||| Sbjct 618746 TTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 618715 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||||||||| || | || |||||| |||| |||||||||||||| ||| | Sbjct 619133 TCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCAAGCTGCTTGCCTGCAAAG 619074 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 || || ||||||||||| ||||| || || || || ||||| || || Sbjct 619073 ATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGAATCTT 619027 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || || | || ||||| || || ||||||||||| | Sbjct 618714 ACCACCACGCAGACGAAGGACCAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAATCGGA 618655 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| | |||||| || || | || | ||||||||||||||||| Sbjct 618654 CAAGGTGCGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGAGG 618595 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || || | || || || Sbjct 618594 GATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCGATGGTGTCGCTGGATTCAAC 618535 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 || | || | |||||| || || | || || |||| Sbjct 618534 CTCGAGGGTAATGGTCTTTCCAGTAAGGGTCTTGACGA 618497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643307311160