Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq176 136 4e-27 seq183 93.3 4e-14 >seq176 Length=1444596 Score = 136 bits (150), Expect = 4e-27 Identities = 298/444 (67%), Gaps = 23/444 (5%) Strand=Plus/Minus Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTT-GCCGCCATCTTTTA 52462 || ||||||||| || ||||| | || || ||||| | |||| ||| |||| || | Sbjct 728203 GTCGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGG-ATCTTTCGCCTCCATTTTCTG 728145 Query 52463 CATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGA 52522 | || | | ||| | ||||| || || || ||| ||||||| |||| || || || Sbjct 728144 GCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATTTCTCGTGA 728085 Query 52523 CGAAGGACTGCACACGGACTTTGCGTGC--------CTCT-ACTACAAGACGCGCGTGAC 52573 ||| || || ||||| ||||| || ||| |||| || ||| | ||| | Sbjct 728084 CGAGGGTCTCCACACTGACTTCGCCTGCTTGCTCTTCTCTCACCTCAACAACCGCCCCAG 728025 Query 52574 CGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAA 52633 | | | | | ||||| || ||| ||||| || ||||| || || Sbjct 728024 CAAGCAGGTTGTGGAGGACATCAT--------TGTC----GAGGCTGTCGCTATTGAGAA 727977 Query 52634 GGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTG 52693 |||||| || || | ||| || || || || ||||| |||||||| | ||||| Sbjct 727976 GGAGTTCTTGACCGACGCCCTTCCCTGCGCCCTTCTGGGTATGAACGCCAACCTGATGTG 727917 Query 52694 CGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTT 52753 | ||||||||||||| ||||| || ||||| |||||| ||||| | | |||||||| Sbjct 727916 CCAGTACATCGAGTTCGTGGCTGACCGTCTCTTGGTGGCCCTCGGCAACTCGAAGTACTT 727857 Query 52754 CAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTT 52813 |||||| ||| || || || || ||| | || || || | || ||||||||||| Sbjct 727856 CAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCCCTGGCTGGAAAGACCAACTT 727797 Query 52814 TTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||||||||| || || || || Sbjct 727796 CTTCGAGAAGCGTGTTGGTGACTA 727773 >seq183 Length=3359036 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| |||||||||||||| | || ||| |||||| || || || || | | | Sbjct 619134 CTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCAAGCTGCTTGCCTGCAAA 619075 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| |||||||| ||||||||||| ||||| || ||||| ||| | || | || | | Sbjct 619074 GATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTC-TTGAATCTTGCTCTTGACGT 619016 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||| | ||| ||||| | || | || || ||||| || || || Sbjct 619015 TG-TCGATCGTGTCCGAGCTCTCGACCTCCAATGTGATTGTCTTGCCAGTGAGCGTCTTG 618957 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 618956 ACAAAGATCTGCAT 618943 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 1361910 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 1361969 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | |||||||| ||||| || || || || || ||||| ||| || || | | | Sbjct 1361970 TAAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 1362029 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| ||||||| || |||| || | || ||||| ||||| || || || | Sbjct 1362030 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 1362089 Query 138605 AA 138606 || Sbjct 1362090 AA 1362091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260917416080