Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq183 107 1e-18 >seq183 Length=3359036 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || ||||| || |||||||||||| || | | ||||||| | || Sbjct 618917 TGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGGGTGCGGCCGTCTTCGAGCTGC 618858 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | |||||| |||||| |||||||| ||||| || ||| ||| Sbjct 618857 TTTCCGGCGAAAATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTATCTTGAATCTTG 618798 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || || | || || || |||||| ||| || || || || ||||| || || || Sbjct 618797 CTCTTCACGTTGTCGATGGTGTCGCTAGATTCAACTTCCAACGTGATGGTCTTGCCGGTG 618738 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || || || || ||||||||| Sbjct 618737 AGGGTCTTGACGAAGATTTGCATA 618714 Score = 86.0 bits (94), Expect = 4e-12 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATT 15031 || |||||||| || || || |||||||||||| || || || | ||||| || | Sbjct 618689 TGGAGGGTAGATTCCTTCTGGATGTTGTAATCG--GACAAGGTGCGGCCATCTTCCAACT 618632 Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTT 15091 | || |||||| | ||||||||||| |||||| || || || |||||||| || | Sbjct 618631 GCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCT 618572 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 | || ||| | || || || ||||| ||| || || | ||||||||| || || | Sbjct 618571 TCGACTTGACATTATCGATGGTGTCGCTGGATTCAACCTCGAGGGTAATGGTCTTTCCAG 618512 Query 15152 TCAGAGTTTTTAC 15164 | || || || || Sbjct 618511 TAAGGGTCTTGAC 618499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357390958984115