Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq183 107 2e-18 >seq183 Length=3359036 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||| || | || || || ||||| || ||||| ||| | Sbjct 618412 CCACCACGCAGGCGCAGAACCAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 618353 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || | ||| || |||||| | |||| |||||||| || || || Sbjct 618352 AGAGTGCGACCATCTTCCAACTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGG 618293 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| |||| |||| |||||| | |||||| Sbjct 618292 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCGATGGTGTCGCTCGACTCGAC 618234 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCA 127091 || | ||| | || |||||||||| Sbjct 618233 CTCAAGGGTGATGGTCTTGCCGGTCA 618208 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| || |||||| |||| Sbjct 1361912 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 1361971 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| ||||| || ||||||||||||||| ||| || ||||| |||| || Sbjct 1361972 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TC 1362030 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 1362031 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 1362090 Query 127105 A 127105 | Sbjct 1362091 A 1362091 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || || || ||||||||| || ||||| ||| || | ||| || ||| Sbjct 618683 GTAGATTCCTTCTGGATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGCTTACCA 618624 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| |||||||| || |||||||||||| ||| ||| |||| Sbjct 618623 GCGAAGATCAAACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTG 618564 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | || || |||| ||| | || || || || || || Sbjct 618563 ACATTATCGATGGTGTCGCTGGATTCAACCTCGAGGGTAATGGTCTTTCCAGTAAGGGTC 618504 Query 127097 TTTAC 127101 || || Sbjct 618503 TTGAC 618499 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||| | |||| || | ||| ||| || ||||| ||||| || Sbjct 619170 TCCACCACGGAGTCGGAGAACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGA 619111 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| || || ||||| || || || |||||| |||||||| || ||||| Sbjct 619110 GAGCGTGCGCCCGTCCTCAAGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGG 619051 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || ||||||||||| || || ||||| |||| |||| ||||||| ||||||| Sbjct 619050 GATACCCTCCTTGTCTTGAATCTTGCTCTTGACGTTG-TCGATCGTGTCCGAGCTCTCGA 618992 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || ||||| || || || || ||||| |||||||| Sbjct 618991 CCTCCAATGTGATTGTCTTGCCAGTGAGCGTCTTGACAAAGATCTGCAT 618943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499379441360