Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq183 93.3 3e-14 >seq183 Length=3359036 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || ||||||||||| || ||||| ||||| ||||| || | || |||| || Sbjct 619151 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCA 619092 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| ||||| ||||| || |||| || | ||||||||||| | Sbjct 619091 AGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGA 619032 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || ||| ||||||| || || || || Sbjct 619031 ATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAATGTGATTGTCTTG 618972 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || ||||| |||||||| Sbjct 618971 CCAGTGAGCGTCTTGACAAAGATCTGCAT 618943 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||| || || ||| || ||||| || ||||| || || ||| | ||| Sbjct 618403 AGGCGCAGAACCAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGA 618344 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||| || || || ||||| ||||| || || | ||| | ||||||| Sbjct 618343 CCATCTTCCAACTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCC 618284 Query 48669 TTGTC 48673 ||||| Sbjct 618283 TTGTC 618279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936490400197