Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq215 141 1e-27 seq193 129 7e-24 seq176 125 9e-23 >seq215 Length=736687 Score = 141 bits (156), Expect = 1e-27 Identities = 104/119 (87%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 1592180 ATCCTCGCCGCCAACTACCTCGACATCAAG--CCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237 ||||| |||||||||||||| ||||||||| ||||| | ||| |||| |||||| | | Sbjct 550769 ATCCTGGCCGCCAACTACCTTGACATCAAGGGCCTCT--TGGATGTTGGTTGCAAGACCG 550712 Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 | ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct 550711 TCGCCAACATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACCTTCAACATCCAG 550653 >seq193 Length=493414 Score = 129 bits (142), Expect = 7e-24 Identities = 116/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||| ||||||||||| ||||| ||||| ||||||||||| | || || |||||| Sbjct 224534 GACAGTATCGGCGGCACCGTGACCTGCGTCATCCGCAACGTGCCCGTGGGTCTGGGCGAG 224593 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| ||||||| | |||| ||||||||||| ||||| |||||| Sbjct 224594 CCTTGCTTCGACAAGCTCGAGGCGAAGATCGCGCACGCCATGCTCAGCATCCCCGCCACC 224653 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| |||||||| ||| ||| || Sbjct 224654 AAGGGCTTCGAGATCGGCTCCGGCTT 224679 Score = 98.7 bits (108), Expect = 1e-14 Identities = 202/298 (68%), Gaps = 8/298 (3%) Strand=Plus/Plus Query 18120 CGTCGGCTGCATCATCGACGGCGTGCCGCCGTG-CATGCCACTGGCCGAGGCCGACATCC 18178 |||||| || ||| |||| ||| |||| || || |||| || |||||| ||| | | Sbjct 223835 CGTCGGTTGTATCGTCGATGGC-TGCCCCCCTGGCATGGAGCTCACCGAGGACGATGTTC 223893 Query 18179 AGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGC 18238 |||||||| || |||| | || || |||||| |||| || | ||||| || || ||| Sbjct 223894 AGCCTCAGATGACTCGGAGACGTCCCGGCCAGAGCGCTCTGACGACGCCCCGGAATGAGA 223953 Query 18239 CCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCG 18298 || ||||| ||||||||||| || ||| |||| |||| || ||| | || | | Sbjct 223954 AGGACCGCGTGGAAATCCAGTCGGGTACCGAGTTCGGCGTCACCCTGGGCACCCCGATTG 224013 Query 18299 GCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCG------ACATGTGCA 18352 || | | || |||| ||||||||||| |||||| || |||| | Sbjct 224014 GCATGATGGTTCGCAACGAGGACCAGCGGCCTAAGGACTATGGCGGTAGCACCATGGACT 224073 Query 18353 AGGTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGC 18410 | || || ||| || ||||||| ||||||| | | || |||||| | ||||| Sbjct 224074 TGTACCCCCGACCCAGCCATGCCGACTTCACCTACCTCGAGAAATACGGCGTGAAGGC 224131 >seq176 Length=1444596 Score = 125 bits (138), Expect = 9e-23 Identities = 173/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| || | || |||||| Sbjct 727764 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCAGCCAGGGAGATC 727823 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||| ||| ||| | ||||| | | | Sbjct 727824 GACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGAAGTACTTCGAGTTGCCGAGGGCCACC 727883 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | || ||||| || || |||||||||||||||||||| ||| ||||||||| || | Sbjct 727884 AAGAGACGGTCAGCCACGAACTCGATGTACTGGCACATCAGGTTGGCGTTCATACCCAGA 727943 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | ||| ||| ||||| ||||| || |||| |||||||| ||| Sbjct 727944 AGGGCGCAGGGAAGGGCGTCGGTCAAGAACTCCTTCTCAATAGCGACAGCCTCGACAATG 728003 Query 868931 AT 868932 || Sbjct 728004 AT 728005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107119586540763