Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq215 141 1e-27 seq176 109 9e-18 seq198 89.7 8e-12 seq221 87.8 3e-11 >seq215 Length=736687 Score = 141 bits (156), Expect = 1e-27 Identities = 119/146 (82%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 ||||||||||| | | || || | ||||| |||||||||||||| ||||||||| Sbjct 550798 AGGTCGACCAAGAGATGTTGTTCGAAATCATCCTGGCCGCCAACTACCTTGACATCAAGG 550739 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 |||| | ||| | || ||||||||||| |||||| | |||||||||||||| ||||||| Sbjct 550738 GCCTCTTGGATGTTGGTTGCAAGACCGTCGCCAACATGATCAAGGGCAAGTCTCCCGAGG 550679 Query 2035732 ACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| |||||| || Sbjct 550678 AGATCCGCAAGACCTTCAACATCCAG 550653 >seq176 Length=1444596 Score = 109 bits (120), Expect = 9e-18 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || || || || ||| |||||| ||||||||||| || | || |||||| ||||||| Sbjct 727773 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCAGCCAGGGAGATCGACTCCATG 727832 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| | | ||| |||| | ||||| | | | | || ||| Sbjct 727833 AAGTCGAAGGGGTTGGTGGCGTTGAAGTACTTCGAGTTGCCGAGGGCCACCAAGAGACGG 727892 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 || || ||||| || |||||||||||||| ||| ||||||||| || | || || | Sbjct 727893 TCAGCCACGAACTCGATGTACTGGCACATCAGGTTGGCGTTCATACCCAGAAGGGCGCAG 727952 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 || || | ||| | | ||||| ||||| || |||| ||||||| ||||| Sbjct 727953 GGAAGGGCGTCGGTCAAGAACTCCTTCTCAATAGCGACAGCCTCGACAATGAT 728005 >seq198 Length=1025085 Score = 89.7 bits (98), Expect = 8e-12 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||| || |||||||| || ||||| |||||||||||| |||||||||| ||| ||| Sbjct 11919 GTACTTCGTCACGGCCTTCGTGCCCTCCGAGACGGCGTGCTTGGCCAGTTCACCGGGCAG 11978 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTC 1485557 || || | ||| | |||||||||||| Sbjct 11979 AATGAGCCTCACAGAGGTCTGGATCTC 12005 >seq221 Length=929178 Score = 87.8 bits (96), Expect = 3e-11 Identities = 192/288 (67%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| ||||| || || |||| || || || || ||||| || || | |||||||| Sbjct 705286 CTGGTCAACATACCGGGCAGTGTTATTGAACACACGAAGCATAGGAACGATACCGTTGGA 705227 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || | | ||||| || | ||| || | | ||| || | || Sbjct 705226 AGAACCGTTGGTTCCACCAATGTAGGATCCGGTGGCACGGATCCGGTGAACGTTCAGACC 705167 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || || || | |||||| || | || || | ||||| || || || || || || Sbjct 705166 GATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGGGTATCATAAATACCATC 705107 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| ||||||| || | ||| |||||||| | || || | | || || Sbjct 705106 AATGCTGTCTTCCTTCATATCGACCAGGAAGCACGAAGCAAGCTGGGGCTGAGGGGTACC 705047 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACAT 2073827 ||||||||| || || || | || |||| | ||| |||||||| Sbjct 705046 GGCATTGAACAGGGTAGGGGAAGCATGCGTGAAGTACTTCTGGGACAT 704999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916220976479921