Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq183 132 9e-26 >seq183 Length=3359036 Score = 132 bits (146), Expect = 9e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| ||||| || |||||||| || || ||||| | Sbjct 618943 TACCACCACGGAGACGGAGCACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGG 618884 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | |||||||| || || ||||| || || || || | || || || || | Sbjct 618883 ACAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCGGGGG 618824 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | ||||| ||||||||||||||| ||||| || || || || || || || ||| ||| Sbjct 618823 GAATTCCCTCCTTATCTTGAATC-TTGCTCTTCACGTTGTCGATGGTGTCGCTAGATTCA 618765 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || || |||||||| || | ||||| || || || ||||| Sbjct 618764 ACTTCCAACGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 618715 Score = 116 bits (128), Expect = 7e-21 Identities = 159/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | |||||| || || ||||| || || || ||||| || | | ||| Sbjct 619157 CGGAGAACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGCCCG 619098 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || || |||||||| || | || || || ||||| || || ||||| Sbjct 619097 TCCTCAAGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTG 619038 Query 82716 TCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||||||| ||||| || || || || ||||| || || | || || ||||| || | Sbjct 619037 TCTTGAATC-TTGCTCTTGACGTTGTCGATCGTGTC-CGAGCTCTCGACCTCCAATGTGA 618980 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || | |||||| ||||| |||||||| Sbjct 618979 TTGTCTTGCCAGTGAGCGTCTTGACAAAGATCTGCAT 618943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981824193461021