Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq221 104 6e-17 >seq221 Length=929178 Score = 104 bits (114), Expect = 6e-17 Identities = 437/687 (64%), Gaps = 5/687 (1%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 ||| ||| || ||||| || ||||| || | || || || || || |||| || | Sbjct 704853 ACTTTTTCGGCTTCAAGACCCTTGAGCGGTCGTACTTGCTGCGGGTGGATGGAAAGGTTG 704912 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 || |||||||| ||| || | | ||||| || | |||||||| ||| | |||||| Sbjct 704913 CCGAGCGTCCTCAGCACCTGCTGATGCGTGTGGCTGTCGGTATTCACGGAGAGGATATTG 704972 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTA 110481 | | ||| || || | | | | ||| | | |||||| | |||| Sbjct 704973 AGCGGGCTATCGAGACCTACCACTTGATGTCCCAGAAGTACTTCACGCATGCTTCCCCTA 705032 Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTA 110541 |||| || || || || || | || | ||||| ||||| || | | || | Sbjct 705033 CCCTGTTCAATGCCGGTACCCCTCAGCCCCAGCTTGCTTCGTGCTTCCTGGTCGATATGA 705092 Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601 | || || ||||| |||||||||||| | || || ||| | ||||| || | Sbjct 705093 AGGAAGACAGCATTGATGGTATTTATGATACCCTGAAGACCTGTGCCATGATTTCCAAGA 705152 Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661 | |||| || || ||| | ||||||| || || | | ||| | | || | Sbjct 705153 CCGCTGGTGGTATCGGTCTGAACGTTCACCGGATCCGTGCCACCGGATCCTACATTGGTG 705212 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | | || ||| |||| | || | ||||| ||| | | || ||||| ||||||| Sbjct 705213 GAACCAACGGTTCTTCCAACGGTATCGTTCCTATGCTTCGTGTGTTCAATAACACTGCCC 705272 Query 110722 AATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778 ||||| | || ||||| ||| | ||| | || || ||||| || || || | Sbjct 705273 GGTATGTTGACCAGGGTGGCAACAAGCGTCCCGGCGCTTTCGCCATCTACCTGGAGCCCT 705332 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 |||| || ||| | || |||||||| || |||||||| || || || || ||| | Sbjct 705333 GGCACTCGGATGTCTTCGAATTCTTGGATCTTCGTAAGAACCACGGTAAGGAGGAAGTGA 705392 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 |||| ||||| | || ||||| | |||| | | || | |||||||| || || | | Sbjct 705393 GAGCCCGTGACCTGTTCTATGCTCTCTGGACTCCCGACCTGTTCATGAAGCGGGTCGAGG 705452 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATAT 110957 || || ||| |||| | || || || || ||||||| || | ||||| || Sbjct 705453 CCAACGGTGACTGGACTCTGTTCTG-CCCCAACGAGGCTCCTGGCCTTGCCGATGTTTAC 705511 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAA 110984 ||| | ||||| || | ||||||||| Sbjct 705512 GGAGACGAGTTCGATGCTCTTTACGAA 705538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186809165756679