Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq176 138 2e-26 >seq176 Length=1444596 Score = 138 bits (152), Expect = 2e-26 Identities = 217/304 (71%), Gaps = 15/304 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| || || ||||||||||| || | || | Sbjct 728671 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAAATTGATC 728613 Query 1455835 TCGGCGCCGACACGGTCCAC-TGGGTGT------CG-CTGAGCGACGACGAGCGCCATTT 1455886 | | ||| | | || | || || || |||| ||| || ||||| | || Sbjct 728612 T----GTCGA-AGGATCTGCATGACTGGAACAACCGTCTGAACGAGGATGAGCGTTACTT 728558 Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946 |||| ||||| || || ||| ||||||||| || ||||| || |||||| || Sbjct 728557 CATCTCTCACGTTCTTGC-TTTCTTCGCCGCCTCGGACGGCATTGTCAATGAGAACTTGC 728499 Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 | ||||| | |||||| || | || ||||| |||| || || || ||||||| Sbjct 728498 TGGAGCGCTTCAGCGGAGAGGTGCAGGTTCCTGAGGCTCGTTGTTTCTATGGATTCCAGA 728439 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || || ||||||||||| ||||||||||| || ||||||||||||||| |||||| Sbjct 728438 TCATGATTGAGAACATCCACTCGGAAACCTACTCTCTTCTGATCGACACCTACATCAAGG 728379 Query 1456067 ACCC 1456070 | || Sbjct 728378 AGCC 728375 Score = 100 bits (110), Expect = 4e-15 Identities = 176/251 (70%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| |||||||| |||| || ||||| ||||| | | ||| | || || || Sbjct 728005 ATCATTGTCGAGGCTGTCGCTATTGAGAAGGAGTTCTTGACCGACGCCCTTCCCTGCGCC 727946 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | || |||||||||| | || |||||||||||||| || || || || ||||| | Sbjct 727945 CTTCTGGGTATGAACGCCAAC-CTGATGTGCCAGTACATCGAGTTC-GTGGCTGACCGTC 727888 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | | | ||| |||||| | |||| ||| | | ||||||| ||| | ||| Sbjct 727887 TCTTGGTGGCCCTCGGCAACTC-GAAGTACTTCAACGCCACCAACCCCTTCGACTTCATG 727829 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 |||| |||||| || | || ||||||||||| |||||| || | ||| || ||| Sbjct 727828 GAGTCGATCTCCCTGGCTGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 727769 Query 1456762 AAGGCCGGCGT 1456772 |||||||| || Sbjct 727768 AAGGCCGGTGT 727758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177788148010718