Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq221 201 1e-46 seq176 87.8 2e-12 >seq221 Length=929178 Score = 201 bits (222), Expect = 1e-46 Identities = 409/604 (68%), Gaps = 4/604 (1%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | || | ||||| || || | ||||| ||||| || || ||| | Sbjct 704921 CCTCAGCACCTGCTGATGCGTGTGGCTGTCGGTATTCACGGAGAGGATATTGAGCGGGCT 704980 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 ||||| ||| |||| ||| ||| |||||||| ||||| || | || ||||||||| Sbjct 704981 ATCGAGACCTACCACTTGATGTCCCAGAAGTACTTCACGCATGCTTCCCCTACCCTGTTC 705040 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 || || ||||| ||| || ||| | | ||||||||||| | |||||||| ||| Sbjct 705041 AATGCCGGTACCCCTCAGCCCCAGCTTGCTTCGTGCTTCCTGGTCGATATGAAGGAAGAC 705100 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 || || || || || || || || ||| |||||| || |||||| | ||| Sbjct 705101 AGCATTGATGGTATTTATGATACCCTGAAGACCTGTGCCATGATTTCCAAGACCGCTGGT 705160 Query 53420 GGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 ||||||||| | || | || | || ||||||| | ||| | || || || | Sbjct 705161 GGTATCGGTCTGAAC-GTTC-ACCGGATCCGTGCCACCGGATCCTACATTGGTGGAACCA 705218 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 |||| || | || ||||| |||||||| || || ||||| ||||| |||||||| | Sbjct 705219 ACGGTTCTTCCAACGGTATCGTTCCTATGCTTCGTGTGTTCAATAACACTGCCCGGTATG 705278 Query 53538 TCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 | |||||||||| ||||| || | |||||||||||||| ||||| |||||| Sbjct 705279 TTGACCAGGGTGGCAACAAGCGTCCCGGCGCTTTCGCCATCTACCTGGAGCCCTGGCACT 705338 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657 | || | | || || | || || ||| ||| || ||| | || || || | || Sbjct 705339 CGGATGTCTTCGAATTCTTGGATCTTCGTAAGAACCACGGTAAGGAGGAAGTGAGAGCCC 705398 Query 53658 GTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 |||||||||| ||||| |||| ||| ||||| |||||| | ||| ||| ||| Sbjct 705399 GTGACCTGTTCTATGCTCTCTGGACTCCCGACCTGTTCATGAAGCGGGTCGAGGCCAACG 705458 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777 || ||| ||| | ||||| |||||| || ||||| | ||| ||||| || | Sbjct 705459 GTGACTGGACTCTGTTCTGCCCCAACGAGGCTCCTGGCCTTGCCGATGTTTACGGAGACG 705518 Query 53778 AGTT 53781 |||| Sbjct 705519 AGTT 705522 Score = 116 bits (128), Expect = 4e-21 Identities = 301/447 (67%), Gaps = 29/447 (6%) Strand=Plus/Plus Query 55494 TGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGT 55553 |||| |||||||| ||||| || || || ||||||| ||||| ||||||| | Sbjct 706280 TGCTGGTGGCGCCCATGCCCACGGCCAGCACCAGTCAGATCCTGGGCTTCAACGAGTGCT 706339 Query 55554 TCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGA 55613 ||||||| |||||| | ||||||||| ||| || || ||||||||||| || | Sbjct 706340 TCGAGCCCTACACGTCGAACATCTACTCGCGTCGTGTTCTGGCAGGTGAGTTC--CAGG- 706396 Query 55614 TCAACAAGCACCTCGT----CAAGGACCTGCAGAAGATCAACAAGTGGAACCCG-CAGA- 55667 || || | ||| || |||||||||| || || | | | | |||| Sbjct 706397 TCGTTAACC-CCTGGTTGCTCAAGGACCTGG------TCGACCTGGGTCTCTGGTCAGAC 706449 Query 55668 ----TCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA---TCTGGAGATTC 55718 | |||| || || | |||||| || || || |||||||| || | |||| Sbjct 706450 AACATGAAGAACCGTATCAT-TGCGGAT-GGTGGATCGGTCCAGAACGTTCCCAACATTC 706507 Query 55719 CTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATT 55777 | | || | |||||| | ||| ||| |||||||| ||| | ||| | || | | Sbjct 706508 C-CGCCGACATCAAGGCTCTCTACAAGACCGTGTGGGAAATTTCCCAGCGGGGTATCCTG 706566 Query 55778 GACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG 55837 | ||| ||| ||||| ||||| |||||||| ||||||||||| || ||||| | || Sbjct 706567 CAGATGGCTGCCGATCGGGGTGCTTACATCGATCAGTCCCAGTCGCTCAACATTCACCTG 706626 Query 55838 GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTC 55897 || | || | ||| |||| | | | ||||||||| || ||||||| ||| | Sbjct 706627 AAGGAGCCCACCATGGGCAAGATCACCAGCATGCACTTTGCGGGCTGGAAGATGGGCTTG 706686 Query 55898 AAGACGGGTATGTACTATCTGCGGACC 55924 ||||| || |||||||| ||||| ||| Sbjct 706687 AAGACCGGCATGTACTACCTGCGTACC 706713 >seq176 Length=1444596 Score = 87.8 bits (96), Expect = 2e-12 Identities = 181/267 (68%), Gaps = 7/267 (3%) Strand=Plus/Plus Query 75005 GGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTT 75064 ||| ||||||| | |||| |||| ||| ||||| || ||||| || || ||| | Sbjct 728374 GGGCTCCTTGATGTAGGTGTCGATCAGAAGAGAGTAGGTTTCCGAGTGGATGTTCTCAAT 728433 Query 75065 GAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAA 75122 | |||| | | |||||| | || ||||| | || ||| || || | |||| Sbjct 728434 CATGATCTGGAATCCATAGAAACAACGAGCCTCAGGAACCTGCACCTCTCCGCTGAAGCG 728493 Query 75123 TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATT 75182 || | | ||||| |||| |||||||||||||||||||| ||||| || || Sbjct 728494 CTCCAGC--AAGTTCTCATTGACAATGCCGTCCGAGGCGGCGAAGAAAGCAAGAACGTGA 728551 Query 75183 TTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCC 75239 ||| |||| |||||||| || | | | |||| ||| || | ||| ||| || | Sbjct 728552 GAGATGAAGTAACGCTCATCCTCGTTCAGACGGTTGTTCCAGTCATGCAGATCCTTCGAC 728611 Query 75240 AAATCAATCTCCTCGACCGTCCAGAAA 75266 | |||||| || ||| | ||||||||| Sbjct 728612 AGATCAATTTCTTCGGCGGTCCAGAAA 728638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214365192200