Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq183 89.7 4e-13 >seq183 Length=3359036 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || ||||||||||| || || || || || || | || || || |||| ||| Sbjct 619151 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCA 619092 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| || |||||||||||||| | || | | ||| ||||| Sbjct 619091 AGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGA 619032 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATACT 39251 || || |||| ||| | | | ||| || ||| ||| || |||| ||||| | Sbjct 619031 ATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGAGCT---CTCGACCTCCAATGTGATTGT 618976 Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || ||||| || |||||||| ||||| Sbjct 618975 CTTGCCAGTGAGCGTCTTGACAAAGATCTGCAT 618943 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || ||| || || || | || |||||||| || || || || ||| Sbjct 1361912 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 1361971 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-C 39215 |||||||||||||||| ||| | || ||| |||||| ||| || |||| ||| | | Sbjct 1361972 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTC 1362030 Query 39216 CACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAA 39275 | || ||||||||||| ||||| | || || | || |||||||| || || || || Sbjct 1362031 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 1362090 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| |||||| || || || ||||||| || || || |||| || ||||| Sbjct 618917 TGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGGGTGCGGCCGTCTTCGAGCTGC 618858 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || || || || |||||||||||||||| ||| | | ||| || | | ||| | | Sbjct 618857 TTTCCGGCGAAAATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTAT-CTTGAATCTT 618799 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 | | ||| | | | || ||||| || || || |||| |||||| | || || || Sbjct 618798 GCTCTTCACGTTGTCGATGGTGTCGCTAGATTCAACTTCCAACGTGATGGTCTTGCCGGT 618739 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||||||||| Sbjct 618738 GAGGGTCTTGACGAAGATTTGCAT 618715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544348814207