Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq183 95.1 8e-15 >seq183 Length=3359036 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || |||||||| || || || ||||| | |||||||| || | Sbjct 618715 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGTTGGAAGTTGAATCTAGC 618774 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| || || || || | || || || || Sbjct 618775 GACACCATCGACAACGTGAAGAGCAAGATTCAAGATAAGGAGGGAATTCCCCCCGACCAG 618834 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || ||||| || || || ||||||| ||||| | |||||||||| Sbjct 618835 CAGCGTCTCATTTTCGCCGGAAAGCAGCTCGAAGACGGCCGCACCCTGTCCGATTACAAC 618894 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 618895 ATCCAGAAAGAGTCCAC 618911 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680 |||| || ||||| || ||||| || || || ||||| ||||| |||| ||||| | | Sbjct 618497 TCGTCAAGACCCTTACTGGAAAGACCATTACCCTCGAGGTTGAATCCAGCGACACCATCG 618556 Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739 | ||| | || | || | | ||||| || ||| | || || || || |||||||| Sbjct 618557 ATAATGTCAAGTCGAAGA-TCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTTTG 618615 Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799 || || || || || || ||||||| | ||||| || |||||||||||| || || Sbjct 618616 ATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAACATCCAGAAG 618675 Query 23800 GAGTCCAC 23807 || || || Sbjct 618676 GAATCTAC 618683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008615441412