Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015-
10-06] 239 sequences; 36,072,589 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq183 95.1 8e-15
>seq183
Length=3359036
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || |||||||| || || || ||||| | |||||||| || |
Sbjct 618715 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGTTGGAAGTTGAATCTAGC 618774
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || ||| || || || || | || || || ||
Sbjct 618775 GACACCATCGACAACGTGAAGAGCAAGATTCAAGATAAGGAGGGAATTCCCCCCGACCAG 618834
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || ||||| || || || ||||||| ||||| | ||||||||||
Sbjct 618835 CAGCGTCTCATTTTCGCCGGAAAGCAGCTCGAAGACGGCCGCACCCTGTCCGATTACAAC 618894
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || |||||||||||
Sbjct 618895 ATCCAGAAAGAGTCCAC 618911
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680
|||| || ||||| || ||||| || || || ||||| ||||| |||| ||||| | |
Sbjct 618497 TCGTCAAGACCCTTACTGGAAAGACCATTACCCTCGAGGTTGAATCCAGCGACACCATCG 618556
Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739
| ||| | || | || | | ||||| || ||| | || || || || ||||||||
Sbjct 618557 ATAATGTCAAGTCGAAGA-TCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTTTG 618615
Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799
|| || || || || || ||||||| | ||||| || |||||||||||| || ||
Sbjct 618616 ATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAACATCCAGAAG 618675
Query 23800 GAGTCCAC 23807
|| || ||
Sbjct 618676 GAATCTAC 618683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008615441412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |