Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq183 152 1e-31 seq116 125 2e-23 seq217 86.0 1e-11 >seq183 Length=3359036 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| |||||||| ||||| |||| |||||||||| || || | || ||| Sbjct 618926 AGCACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGGGTGCGGCCGTCT 618867 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || || || || |||||||| ||||| || ||||| ||| Sbjct 618866 TCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTATCT 618807 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| ||||||||||| | ||| || || |||||||| ||| Sbjct 618806 TGAATCTTGCTCTTCACGTTGTCGATGGTGTCGCTAGATTCAACTTCCAACGTGATGGTC 618747 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | |||||| Sbjct 618746 TTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 618715 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || ||||| || |||| |||||||||| ||| || | |||||| Sbjct 618698 AGGACCAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAATCGGACAAGGTGCGGCCATCT 618639 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||||||||| | || || |||||||| || ||||| |||||||| Sbjct 618638 TCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 618579 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || ||| || || | || || ||| Sbjct 618578 TGGATCTTCGACTTGACATTATCGATGGTGTCGCTGGATTCAACCTCGAGGGTAATGGTC 618519 Query 225682 TTGCCCGT 225689 || || || Sbjct 618518 TTTCCAGT 618511 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| |||||||| ||||||| ||||| |||| || ||| Sbjct 618407 ACGCAGGCGCAGAACCAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGACAGAGT 618348 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| |||||||| || || || || ||||| || || || || Sbjct 618347 GCGACCATCTTCCAACTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCC 618288 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| | || || || | Sbjct 618287 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCAAG 618228 Query 225672 CGTGATCGTCTTGCCCGTCA 225691 ||||| |||||||| |||| Sbjct 618227 GGTGATGGTCTTGCCGGTCA 618208 Score = 107 bits (118), Expect = 5e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 225518 TGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAG 225577 || || | || |||| ||||| ||| || || | ||||| || |||||||| |||| Sbjct 1361904 TGCATACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAG 1361963 Query 225578 CGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCA 225637 |||||||||| || || |||||||| || || || |||||||| |||||||| ||| | Sbjct 1361964 CGAAGATAAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA 1362023 Query 225638 CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTT 225697 | ||||||||||| | || ||||| | || || ||||| ||||||| || | Sbjct 1362024 CGTTGTCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCT 1362083 Query 225698 TTATGAA 225704 | | ||| Sbjct 1362084 TGACGAA 1362090 Score = 105 bits (116), Expect = 2e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||| || || ||||| || ||| || || || | ||||| || | | || Sbjct 619164 ACGGAGTCGGAGAACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGT 619105 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||| || || |||||||| || || ||||| || || || ||||| || || ||||| Sbjct 619104 GCGCCCGTCCTCAAGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGGGATACC 619045 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| ||||| ||| || ||||| ||||| ||| | || || || || Sbjct 619044 CTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAA 618985 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 618984 TGTGATTGTCTTGCCAGT 618967 >seq116 Length=5892 Score = 125 bits (138), Expect = 2e-23 Identities = 192/273 (70%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||||||||| ||| || || ||| | ||||||| ||||||| | | Sbjct 187 ACTTTATATTTAATGCTTGCATTATTCTCAGGTTTATTAGGTACAGCATTTTCTGTATTA 246 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560 ||||| ||||||||| ||| ||| ||| |||| | | |||| ||| |||| | || Sbjct 247 ATAAGATTAGAATTATCTGGTCCAGGTGTTCAATTTGT---TGGTGATAACCAATTATAT 303 Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || ||| || || || || || | | ||||||||||| | |||||||| | | | Sbjct 304 AATAGTATAATAACAGCACACGCTATAATGATGATTTTCTTCATGGTTATGCCAGCTTTA 363 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 ||||| || ||||| |||| || | || ||| | | |||| ||| |||||||| || Sbjct 364 ATAGGAGGATTCGGTAATTTCTTATTACCATTATTAGTGGGTGGTCCAGATATGGCATTC 423 Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 || || | || ||||| |||||||||||| || Sbjct 424 CCTAGATTAAATAATATTAGTTTTTGATTATTA 456 >seq217 Length=796945 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| || || || || |||| ||||| || | | ||| Sbjct 163300 ACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGT 163359 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| || || || ||||| || || || || Sbjct 163360 ACGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCC 163419 Query 225612 TTCCTTGTCT 225621 ||||||||| Sbjct 163420 CTCCTTGTCT 163429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192527548245866