Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq221 149 9e-31 seq176 89.7 7e-13 >seq221 Length=929178 Score = 149 bits (164), Expect = 9e-31 Identities = 463/715 (65%), Gaps = 4/715 (1%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || || ||||| ||||||| | | |||||| || || || || | || | | Sbjct 705525 TCGAACTCGTCTCCGTAAACATCGGCAAGGCCAGGAGCCTCGTTGGGGCAGAACAGAGTC 705466 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||| | ||| ||||| ||||| || || || || |||| |||||| || Sbjct 705465 CAGTCACCGTTGGCCTCGACCCGCTTCATGAACAGGTCGGGAGTCCAGAGAGCATAGAAC 705406 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 || || |||| ||| ||| || || || ||||| |||||| | ||| || | Sbjct 705405 AGGTCACGGGCTCTCACTTCCTCCTTACCGTGGTTCTTACGAAGATCCAAGAATTCGAAG 705346 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| || ||||| || || || || || || | | | || || || || || || ||| Sbjct 705345 ACATCCGAGTGCCAGGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACCC 705286 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||| | |||||||||||| | || | | ||| |||| || ||||| || Sbjct 705285 TGGTCAACATACCGGGCAGTGTTATTGAACACACGAAGCATAGGAACGATACCGTTGGAA 705226 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | ||| || |||||| ||| || ||| ||||| || || || || Sbjct 705225 GAACCGTTGGTTCCACCAATGTAGGATCCGGTGGCACGGATCCGGTGAACGTTCAGACCG 705166 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || || || | |||||| |||| || ||||| || || || Sbjct 705165 ATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGGGTATCATAAATACCATCA 705106 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || || || ||| |||| | | || || || || | || | ||| || || Sbjct 705105 ATGCTGTCTTCCTTCATATCGACCAGGAAGCACGAAGCAAGCTGGGGCTGAGGGGTACCG 705046 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 ||||| |||| ||||| || ||||| ||||| | || | || | | | ||| || Sbjct 705045 GCATTGAACAGGGTAGGGGAAGCATGCGTGAAGTACTTCTGGGACATCAAGTGGTAGGTC 704986 Query 77060 TCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGC 77119 || ||| | || |||||| | ||||| || ||||| |||||||||| || ||| Sbjct 704985 TCGATAGCCCGCTCAATATCCTCTCCGTGAATACCGACAGCCACACGCATCAGCAGGTGC 704926 Query 77120 TGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 77179 ||||| || || || ||| || | || |||||| || || | || || Sbjct 704925 TGAGGACGCTCGGCAACCTTTCCATCCACCCGCAGCAAGTACGACCGCTCAAGGGTCTTG 704866 Query 77180 AAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 || || ||| ||||||| ||||| || | ||||| | |||| |||| || || Sbjct 704865 AAGCCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTACACAATAGCCGAGTTGAG 704813 >seq176 Length=1444596 Score = 89.7 bits (98), Expect = 7e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || || ||||| |||||||| || |||||||| || ||||| || || | ||| Sbjct 728100 TCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAAATGGAGGCG 728159 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAG 46778 |||||||| || ||||| || || || || || ||||| ||||| || Sbjct 728160 AAAGATCCGGAGAAGAAGATACCCTCAACGGCGGCGAAGGCGACGAG 728206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932270108480