Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq183 123 6e-23 >seq183 Length=3359036 Score = 123 bits (136), Expect = 6e-23 Identities = 161/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||| |||||||| |||||||| |||||||||||||||| | || | Sbjct 618933 GAGACGGAGCACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGGGTGCG 618874 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || ||||| |||||||| || || | ||||||||| | | ||||| Sbjct 618873 GCCGTCTTCGAGCTGCTTT--CCGGCGAAAATGAGACGCTGCTGGTCGGGGGGAATTCCC 618816 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| |||||||| || || || | || | | |||| | || ||||| | Sbjct 618815 TCCTTATCTTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGCTAGATTCAACTTCCAAC 618756 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| ||||| ||||| ||||||| ||||| Sbjct 618755 GTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 618715 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||| ||| || || || || || ||| || || |||||||| || | | || | Sbjct 619161 GAGTCGGAGAACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCG 619102 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||| || || || || || || ||||| || | ||||||||||| | ||| || || Sbjct 619101 CCCGTCCTCAAGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTC 619042 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || ||||| | || | |||| || ||||| || || | || Sbjct 619041 CTTGTCTTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAATGT 618982 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| || |||| |||||| Sbjct 618981 GATTGTCTTGCCAGTGAGCGTCTTGACAAAGATCTGCAT 618943 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || ||||| || || |||||||||||||||| || || | |||||| Sbjct 618698 AGGACCAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAATCGGACAAGGTGCGGCCATCT 618639 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || |||||||| | | ||||||||| | | ||| || ||||| || Sbjct 618638 TCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 618579 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAG 152070 || || || |||||| | || | | ||| ||| | || || || || ||||| | Sbjct 618578 TGGATCTTCGACTTGACATTATCGATGGTGTCGCTGGA--TTCAACCTCGAGGGTAATGG 618521 Query 152071 TTTTGCCCGTGAGAGTCTTCACGA 152094 | || || || || ||||| |||| Sbjct 618520 TCTTTCCAGTAAGGGTCTTGACGA 618497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153817266784369