Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq183 140 8e-28 seq221 107 5e-18 >seq183 Length=3359036 Score = 140 bits (154), Expect = 8e-28 Identities = 157/209 (75%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| ||||| || || ||||| || || || ||||| | || || ||| ||| Sbjct 618718 CAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGTTGGAAGTTGAATCTAGC--- 618774 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| ||||| || |||||||| || || || ||||| || || |||||| Sbjct 618775 GACACCATCGACAACGTGAAGAGCAAGATTCAAGATAAGGAGGGAATTCCCCCCGACCAG 618834 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||||||||| ||||||||||| || | || || ||||||| ||| Sbjct 618835 CAGCGTCTCATTTTCGCCGGAAAGCAGCTCGAAGACGGCCGCACCCTGTCCGATTACAAC 618894 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| ||||| || || || || ||||| Sbjct 618895 ATCCAGAAAGAGTCCACTCTTCACCTTGT 618923 Score = 138 bits (152), Expect = 3e-27 Identities = 152/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || || ||||||||||| ||| | |||||||||| Sbjct 618497 TCGTCAAGACCCTTACTGGAAAGACCATTACCCTCGAGGTTGAATCCAGCGACACCATCG 618556 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| ||||| |||||||| || || |||||||| |||||||| || | | Sbjct 618557 ATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTTTGA 618616 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAA 178109 ||||||| || || ||| | |||||||| | || |||| ||||||| ||| |||| || Sbjct 618617 TCTTCGCTGGTAAGCAGTTGGAAGATGGCCGCAC-CTTGTCCGATTACAACATCCAGAAG 618675 Query 178110 GAATCAACACTGCATCTTGT 178129 ||||| || || || || || Sbjct 618676 GAATCTACCCTCCACCTGGT 618695 Score = 127 bits (140), Expect = 5e-24 Identities = 144/192 (75%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || |||||||| ||||| || ||| ||||||||||| |||||||| Sbjct 618210 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGAGC---GACACCATCGACAACGTCAAG 618266 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || || || ||||| || Sbjct 618267 TCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATTTTCGCTGGC 618326 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || ||| | |||||||| | ||||| |||| || ||| ||||||| ||||| || || Sbjct 618327 AAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAACATCCAAAAGGAATCCACCCTC 618386 Query 178122 CATCTTGTTTTG 178133 || || ||| || Sbjct 618387 CACCTGGTTCTG 618398 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || ||||| | ||||| || ||||| ||| Sbjct 618946 CAGATCTTTGTCAAGACGCTCACTGGCAAGACAATCACATTGGAGGTCGAGAGCTCGGAC 619005 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| ||||| || || ||||||||||||||||| Sbjct 619006 ACGATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAGGGTATCCCTCCGGACCAGCAG 619065 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || || || | || || | || || ||| | Sbjct 619066 CGTCTGATCTTTGCAGGCAAGCAGCTTGAGGACGGGCGCACGCTCTCTGACTACAACATT 619125 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || ||||| || ||| | ||||| Sbjct 619126 CAGAAGGAGAGCACGCTGCACCTGGTTCTCCGACTC 619161 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 1362091 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 1362035 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 1362034 CATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCG 1361975 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 ||||||||||| || || ||||| || ||||| | || || ||| || ||| |||| Sbjct 1361974 TCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 1361915 Query 178106 AAA 178108 || Sbjct 1361914 GAA 1361912 >seq221 Length=929178 Score = 107 bits (118), Expect = 5e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 214264 TACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCTCG 214323 |||| ||| ||||||| || || || ||||| ||||| |||| || ||||||||| Sbjct 705543 TACTGTTCGTAAAGAGCATCGAACTCGTCTCCGTAAACATCGGCAAGGCCAGGAGCCTCG 705484 Query 214324 TTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGGAA 214383 ||||||||||| ||| |||| | || || || ||| | |||||||| ||||||| | Sbjct 705483 TTGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCGACCCGCTTCATGAACAGGTCGGGA 705424 Query 214384 GTCCAGATTGCATAAAAAATCTCTCTGGCTCTCA 214417 ||||||| ||||| || | || | |||||||| Sbjct 705423 GTCCAGAGAGCATAGAACAGGTCACGGGCTCTCA 705390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727513949366