Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq183 143 2e-29 >seq183 Length=3359036 Score = 143 bits (158), Expect = 2e-29 Identities = 175/232 (75%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| |||||||||||||||||||||||||| ||||| ||| Sbjct 619169 CCACCACGGAGTCGGAGAACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAG 619110 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| |||| || ||||||||||| || || ||||| ||||| ||||||| || Sbjct 619109 AGCGTGCGCCCGTCCTCAAGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGGG 619050 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | |||||||| | ||| | ||||| | ||| | | | ||||| ||| || Sbjct 619049 ATACCCTCCTTGT-CTTGA-ATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCT---CT 618995 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| || || || || || || |||||||| || || |||||||| Sbjct 618994 CGACCTCCAATGTGATTGTCTTGCCAGTGAGCGTCTTGACAAAGATCTGCAT 618943 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || ||| ||| ||||| ||||| || ||||| Sbjct 618941 CCACCACGGAGACGGAGCACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGAC 618882 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||||||||| |||||||| || || ||||| ||||| | |||| Sbjct 618881 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCGGGGGGA 618822 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||| || || || |||| ||| | | | |||||||| || || || Sbjct 618821 ATTCCCTCCTTATCTTGAATCTTGCTCTTC-ACGTTGTCGATGGTGTCGCTAGATTCAAC 618763 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||| || || || || || || ||||| ||||| || ||||| Sbjct 618762 TTCCAACGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 618715 Score = 120 bits (132), Expect = 3e-22 Identities = 138/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || || |||||||| || ||||| | Sbjct 1361910 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 1361969 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 | || ||||| ||||| | ||| | || |||||||||| ||| || ||| | || | Sbjct 1361970 TAAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 1362028 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 1362029 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1362088 Query 41852 AAA 41854 ||| Sbjct 1362089 AAA 1362091 Score = 116 bits (128), Expect = 3e-21 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| || || ||| ||||| || ||||| |||||||| Sbjct 618412 CCACCACGCAGGCGCAGAACCAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 618353 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | ||||||||| ||||| ||||||||||| ||||| | ||| Sbjct 618352 AGAGTGCGACCATCTTCCAACTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGG 618293 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | |||||||||||||| || Sbjct 618292 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGCTCGACTCGAC 618234 Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840 ||| | || || || || || |||| Sbjct 618233 CTCAAGGGTGATGGTCTTGCCGGTCA 618208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302618866800