Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq60 123 3e-23
>seq60
Length=156840
Score = 123 bits (136), Expect = 3e-23
Identities = 201/287 (70%), Gaps = 3/287 (1%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || ||||| | || ||| |||| ||||| ||||||||||| |||||
Sbjct 140322 ATGTAGGTGTCGATTAAGAGAGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGG 140381
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|||||||||||||| || || || | | ||| ||||| || ||| || || | |
Sbjct 140382 AATCCGTAAAAGCAACGAGCCTCAGGGACTTGGACTTCACCGCTGAAGCGCTCAACCAAG 140441
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
|| ||||| |||||||||||| || || ||||| |||| ||| || ||||| |||
Sbjct 140442 TTCTCGTTGACGATGCCGTCGGAAGCAGCAAAAAATGCCAGTATGTGGGAGATGAAGTAT 140501
Query 17414 TTTTCGTC--CGGT-GTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470
|| ||||| | | | || | |||||| | |||||||| || | ||| | |||
Sbjct 140502 TTCTCGTCATCATTCAGACGATTGTTCCAGTCGTGCAAATCTTTTGACAGATCGATCTCT 140561
Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
|||| ||||| || |||| | |||||||| ||||| | ||| ||
Sbjct 140562 TCGGCCGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTGCCAGAT 140608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517541149107840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |