Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq60 141 1e-28
>seq60
Length=156840
Score = 141 bits (156), Expect = 1e-28
Identities = 188/259 (73%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 16500 TTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTA 16559
|||| ||||| |||||||| || ||||| ||||| || ||||| |||||||| | |
Sbjct 140350 TTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAAAAGCAACGAGCCTCAGGGA 140409
Query 16560 TTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAG 16619
||| ||||| || || || || ||| |||||| || ||||| ||||| ||||
Sbjct 140410 CTTGGACTTCACCGCTGAAGCGCTCAACCAAGTTCTCGTTGACGATGCCGTCGGAAGCAG 140469
Query 16620 CAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCA-GAT--GTAAGAATATGCC 16676
||||||| |||| |||||| ||||| ||||| |||||| || | || | | ||
Sbjct 140470 CAAAAAATGCCAGTATGTGGGAGATGAAGTATTTCTCGTCATCATTCAGACGATTGTTCC 140529
Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736
| || | |||||||| || | ||| | ||||| | |||||| ||| |||| | ||||
Sbjct 140530 AGTCGTGCAAATCTTTTGACAGATCGATCTCTTCGGCCGTCCAGAAGGAAGCCTCGGCCT 140589
Query 16737 TTTTATACATTTTCCAAAT 16755
|||| ||||||| ||| ||
Sbjct 140590 TTTTGTACATTTGCCAGAT 140608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511410001836160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |