Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq95 156 5e-33
>seq95
Length=111136
Score = 156 bits (172), Expect = 5e-33
Identities = 276/399 (69%), Gaps = 4/399 (1%)
Strand=Plus/Minus
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929
|||||||||||| | || ||| ||||| |||||||||||| | || || | |
Sbjct 30473 ACGTAGAACTGGGCGAAGACGTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGCG 30414
Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989
||||||||| | | || || | |||| | || || ||||||||| |||||| |
Sbjct 30413 TTCCAGGCGCTCATGATGATGCGCCTGTCGTACGGCTTGTTCTTGATCTTGTCTATCACG 30354
Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049
|| ||||||||| || |||| || ||| || | ||||| ||| | ||| | ||
Sbjct 30353 TCGGCGAGCTGGTCGACTCCCTTGCCGGAGTAGTCGGCCTTGGCGTCGATGTATTCTGCG 30294
Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109
|| ||||| | ||||||||| ||||| ||||| |||||||| || ||| | ||||
Sbjct 30293 CCAAAGTGGCGCCACTGGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGTGCGTG 30234
Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CC 146167
|| || | | |||| || || || || |||||| | ||||| ||||||||||| |
Sbjct 30233 AGGCCCAGGCTGTCGAGAAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGCCGGCG 30174
Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227
| || ||| || || ||| |||| ||| |||||||||||| || || || ||
Sbjct 30173 TTGCTGAGGGC-CA-GCGAGGACGTGTTGCCCTCGATGAACCAGAGGAGTTCGGTGATGA 30116
Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
| | | ||| || | ||||||||| || || ||||
Sbjct 30115 CGGCGCGGAGGAACACGCGCTTGGTGGTGAGGAGCGGGA 30077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590071725339520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |