Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq95 156 5e-33 >seq95 Length=111136 Score = 156 bits (172), Expect = 5e-33 Identities = 276/399 (69%), Gaps = 4/399 (1%) Strand=Plus/Minus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | || ||| ||||| |||||||||||| | || || | | Sbjct 30473 ACGTAGAACTGGGCGAAGACGTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGCG 30414 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989 ||||||||| | | || || | |||| | || || ||||||||| |||||| | Sbjct 30413 TTCCAGGCGCTCATGATGATGCGCCTGTCGTACGGCTTGTTCTTGATCTTGTCTATCACG 30354 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 || ||||||||| || |||| || ||| || | ||||| ||| | ||| | || Sbjct 30353 TCGGCGAGCTGGTCGACTCCCTTGCCGGAGTAGTCGGCCTTGGCGTCGATGTATTCTGCG 30294 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109 || ||||| | ||||||||| ||||| ||||| |||||||| || ||| | |||| Sbjct 30293 CCAAAGTGGCGCCACTGGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGTGCGTG 30234 Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CC 146167 || || | | |||| || || || || |||||| | ||||| ||||||||||| | Sbjct 30233 AGGCCCAGGCTGTCGAGAAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGCCGGCG 30174 Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227 | || ||| || || ||| |||| ||| |||||||||||| || || || || Sbjct 30173 TTGCTGAGGGC-CA-GCGAGGACGTGTTGCCCTCGATGAACCAGAGGAGTTCGGTGATGA 30116 Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | | | ||| || | ||||||||| || || |||| Sbjct 30115 CGGCGCGGAGGAACACGCGCTTGGTGGTGAGGAGCGGGA 30077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590071725339520