Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq60 118 1e-21
>seq60
Length=156840
Score = 118 bits (130), Expect = 1e-21
Identities = 183/259 (71%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 16533 TTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATA 16592
|||| || || || |||||||| ||||| || || |||||||| | ||| || | |
Sbjct 140350 TTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAAAAGCAACGAGCCTCAGGGA 140409
Query 16593 TTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTG 16652
||| |||||| | || | || | ||||| ||||| || || || ||| ||| |
Sbjct 140410 CTTGGACTTCACCGCTGAAGCGCTCAACCAAGTTCTCGTTGACGATGCCGTCGGAAGCAG 140469
Query 16653 CAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAA-GTTTTAACC 16709
||||||| || |||||||| || || | ||| |||| ||| | | | | || ||
Sbjct 140470 CAAAAAATGCCAGTATGTGGGAGATGAAGTATTTCTCGTCATCATTCAGACGATTGTTCC 140529
Query 16710 AGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCT 16769
|||| ||||||||||| | ||||| |||||| | ||||| || ||||| | ||||
Sbjct 140530 AGTCGTGCAAATCTTTTGACAGATCGATCTCTTCGGCCGTCCAGAAGGAAGCCTCGGCCT 140589
Query 16770 TTTTATACATTTTCCATAT 16788
|||| ||||||| ||| ||
Sbjct 140590 TTTTGTACATTTGCCAGAT 140608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462508022396800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |