Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq203 376 2e-99
seq303 102 7e-17
seq60 100 3e-16
seq245 96.9 3e-15
>seq203
Length=54532
Score = 376 bits (416), Expect = 2e-99
Identities = 1227/1889 (65%), Gaps = 40/1889 (2%)
Strand=Plus/Plus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCG--GTTTG-GTGCGAAGATAATACAT 22161
|| |||||| || ||||| || | |||||| | | ||| ||||| | || |||||
Sbjct 6064 CTGGTCCACGGTGAACTGGATAGG---TGCGGCAGCAGCTTGCGTGCGCAAGTAGTACAT 6120
Query 22162 GCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACT 22221
||||||||| ||||| | |||||| | ||| || || || || | || || |
Sbjct 6121 GCCCGTCTTGAGACCTAGCTTCCAGCCAGTAAAGTGCATGGAAGTGATCTTGCCCATGGT 6180
Query 22222 CGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGC 22281
|| | ||||| | |||| || || ||| || || || || || || || ||
Sbjct 6181 GGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACCACGGTCAGC 6240
Query 22282 GGCCATATTTATCAA-TGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGA 22340
||||| | | | ||| || || |||||||| || || ||||| || |||
Sbjct 6241 AGCCATCTGCACGACGTGT-CGTTGAGAAATTTCCCAAACAGTTTTGTAGAGAGCTTTGA 6299
Query 22341 TCTCTAACGGTATCGATTCG--ATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT 22398
| || ||| || ||| | || |||| | || ||||| | | ||||| |||
Sbjct 6300 TATCGGCCGGGAT--ATTGGGGATGTTCTGAATAGAACCGTTCTCGGCAATGATACGATT 6357
Query 22399 TTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCAC 22458
|| |||| ||| ||| | || ||| || | |||||||| || | || ||
Sbjct 6358 CTTCATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGCCAGGGATTGAC 6417
Query 22459 CACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAA 22518
|| || || || || | || ||| ||||| |||||||||||||| ||| | || |||||
Sbjct 6418 AACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAAGGCTCGAA 6477
Query 22519 AGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAG 22578
| |||||||| ||||| ||||||| ||| ||||| || ||||| || || | ||| |
Sbjct 6478 GCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCGAGCAGCAA 6537
Query 22579 CGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTC-TTGAGCATCGACCAGTCCCACAG 22635
||||| | | || |||| |||| | | ||| ||||| | ||| ||||| ||
Sbjct 6538 TGAGTTGCGAATCCCATGCTCCTTGA---TCTGCTCCTTGAGGCTATCCCACTCCCAGAG 6594
Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCT 22695
|| || ||| |||| ||||||||| ||| | || | | ||| | | | ||||
Sbjct 6595 GTCAGAAGGCTTCAC---GTCCCACATGTCGAACTGAAGGATGCC-CTCCGAGGCGGGAG 6650
Query 22696 -GCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACG 22754
||| | | | || |||| || || | | | ||| | |||| || | |
Sbjct 6651 AGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAGAGGCAGTGAGGG 6710
Query 22755 CGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTT 22810
| | | ||| || ||||| || || | |||||| | || ||| || |||
Sbjct 6711 CAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGAC---- 6766
Query 22811 TCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATC 22870
||| | ||||| |||| | ||| ||||| || | |||||| ||||| | ||| ||
Sbjct 6767 TCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAATA 6826
Query 22871 GGTCGGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCGAATCGA 22928
||||||| | || || | ||| | |||| | | || || || ||| |
Sbjct 6827 GGTCGGTGTCGCATGTTG--CTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAA 6884
Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988
| ||||||||| ||| | || | | ||| | | |||||||
Sbjct 6885 TGATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGT 6944
Query 22989 AAACGCCCGA-TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGG 23045
| ||| ||||| ||||||| | | || | ||||| | |||||||| |
Sbjct 6945 AGCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATACAG 7004
Query 23046 CCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCG 23105
| ||||| || || | |||||| | |||||| || || || ||| | || |
Sbjct 7005 CGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGATTG 7064
Query 23106 TGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCG 23165
| ||||| || |||| ||||| |||| || || | |||||||||||||||| | ||
Sbjct 7065 TTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGGAT 7124
Query 23166 TGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTC 23225
| ||||||||| ||| | || | ||| | ||| | |||| || ||| |||
Sbjct 7125 TACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGAGCTTCTGGGCACGAATG-GTC 7183
Query 23226 GCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAA 23284
||||| ||| ||| || ||| ||||| | || | || ||||| || | |||||
Sbjct 7184 GCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCCTCGCCGTAG 7243
Query 23285 CAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCA 23344
||||| ||||||||||| ||| | || ||||| ||| |||| || |||||
Sbjct 7244 CAGTCAGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTTCTTTTCG 7303
Query 23345 ACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACC 23404
|| || |||| |||||||| || ||||| ||||| ||| | || || || || ||
Sbjct 7304 ACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGGACT 7363
Query 23405 TCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGC 23464
|| || || ||| ||||||| |||||| | || || ||||| || || ||||| |||
Sbjct 7364 TCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTGCCAAGGC 7423
Query 23465 TCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCC 23524
|| | ||||| |||||| || || |||| ||| ||||| ||||| || || || | |||
Sbjct 7424 TCCAAGTAAATGGCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCTGGCA 7483
Query 23525 GTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCC 23584
||||||||| | || | ||||| || | || ||| ||||||| |||| ||| ||
Sbjct 7484 GTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGTGCCTGCA 7543
Query 23585 ACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTC 23644
| || || | || |||| ||| || | || || || || || || ||
Sbjct 7544 ATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACCACCAGCCATCTTG 7603
Query 23645 GATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTC 23704
|| ||||| ||||| || || ||||| |||||||| |||||||||||||| || |
Sbjct 7604 GAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTCCTTCATG 7663
Query 23705 GCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGG 23764
| || | ||| || || |||| || || || || | || ||| ||||| ||
Sbjct 7664 TCAACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTTGAAGAGTGTGGGC 7723
Query 23765 CTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATG 23824
||| || |||||| | | ||||| |||| ||| || || | | | |||||
Sbjct 7724 GAGGCATGTGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGACTCGCTCAATA 7783
Query 23825 TCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTG 23884
| ||||| ||||||| || || ||||| ||||||| ||| || | |||||| |
Sbjct 7784 TTGTCTCCCCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCCGCTCGACAATC 7843
Query 23885 ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAG 23944
|||||| | ||||| |||||||| || | | || || || ||||| || | |||
Sbjct 7844 TTGCCGTTGAGTTTGAGAAGATATGACCGCTCTAAAGTCTTGAAGCCAAAGTACTGGTAG 7903
Query 23945 TTAAAGTCACGATCGTGCACTATGGCCGA 23973
|| ||||| | || | || ||||| ||
Sbjct 7904 TTGAAGTCTCTGTCATAGACAATGGCGGA 7932
>seq303
Length=27345
Score = 102 bits (112), Expect = 7e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| |||||| |||| || || || |||||| |||| || || | || || | |||
Sbjct 11275 TCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCATCG 11334
Query 31263 A-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
| |||| |||| ||| | | | ||||||||| | || |||||||||||||||||
Sbjct 11335 ACAACGTGAAAACCAAGATTCAAG-ATAAGGAAGGCATCCCTCCCGACCAGCAGCGTCTG 11393
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| |||||||| || ||| ||||||| || | |||||| ||||| || ||
Sbjct 11394 ATTTTCGCTGGTAAGCAGCTGGAAGATGGCCGTACGCTCGCCGATTACAACATCCAGAAG 11453
Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || |||||||| || || | || | |||||||
Sbjct 11454 GAGTCCACACTTCATCTTGTTCTCCGCCTTCGTGGCGGTA 11493
Score = 96.9 bits (106), Expect = 3e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243
||| ||| ||||||||||||||| || || || || ||||| || ||||| | || ||
Sbjct 10967 GAAGCAATCATGCAAATTTTCGTCAAAACCCTTACCGGCAAGACCATCACTCTTGAGGTC 11026
Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCC 31302
|| | || |||| |||| | ||||| || || || ||||||||| || | ||
Sbjct 11027 GAGTCATCTGACACCATCGACAATGTCAAGACCAAG-ATTCAGGACAAGGAGGGGATCCC 11085
Query 31303 GCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAG 31362
||||| || |||||||| || || ||||| || ||| | || ||| || |
Sbjct 11086 CCCCGATCAACAGCGTCTGATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGC 11145
Query 31363 CGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || |||||||| || || || ||||||||||| || ||
Sbjct 11146 AGACTACAACATTCAGAAGGAGTCTACTCTTCATCTTGTGCT 11187
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || ||||| || || |||||| |||| || || ||||
Sbjct 11493 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTGGAGTCGTCT 11552
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | || ||| || || || ||||||||| | || ||||| |||
Sbjct 11553 GACACTATAGACAATGTGAAAACGAAGATTCAAGATAAGGAAGGCATTCCTCCCGATCAG 11612
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || |||||||| || ||| | || ||
Sbjct 11613 CAGCGTCTTATCTTCGCTGGAAAGCAGCTCGAGGA 11647
>seq60
Length=156840
Score = 100 bits (110), Expect = 3e-16
Identities = 202/296 (68%), Gaps = 9/296 (3%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||||||||| || || || || ||||| | |||||| | || |||
Sbjct 140608 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACGGCCGAAGAGATCGATCTG 140549
Query 57630 TCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGA-GAGAAAT--TTTATT 57683
|| || ||| || ||| ||| || || || || ||| ||||||| || ||
Sbjct 140548 TCAAAAGATTTGCACGACTGGAACAATCGTCTGAATGA---TGACGAGAAATACTTCATC 140492
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
||| | |||| ||||| || || ||||| || || || |||||||| ||||| ||
Sbjct 140491 TCCCACATACTGGCATTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAACTTGGTTGAG 140432
Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803
| || ||||| ||||| | ||||| | |||||||||||||| || |
Sbjct 140431 CGCTTCAGCGGTGAAGTCCAAGTCCCTGAGGCTCGTTGCTTTTACGGATTCCAGATCATG 140372
Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859
|| || ||| | || || |||| || || || | ||||| || ||| | |||||
Sbjct 140371 ATGGAGAACATCCACTCGGAAACATACTCTCTCTTAATCGACACCTACATCAAGGA 140316
Score = 87.8 bits (96), Expect = 2e-12
Identities = 331/512 (65%), Gaps = 22/512 (4%)
Strand=Plus/Minus
Query 57914 CAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACG--GCCACGTTCGCCGAG 57971
|||||||||||| ||| | ||| ||||| || | | | ||| |||||| ||
Sbjct 140202 CAAGAAGGCAGAATGGGCTATCCGCTGGAT--TCAGGACAAAGAATCCAGCTTCGCCCAG 140145
Query 57972 AGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATA 58031
| | | || || || || || |||||||| ||||| || ||||| | ||
Sbjct 140144 CGCTTGGTTGCTTTTGCTGCTGTGGAAGGTATTTTCTTCAGCGGTGCTTTTGCTTCTATC 140085
Query 58032 TTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCG 58091
|| ||| ||||||| || ||| |||||||||| || || || |||||| || || |||
Sbjct 140084 TTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAACGAATTAATCTCG 140025
Query 58092 CGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAA 58151
|| || ||||| | || || || ||||| ||| | || |||||||| ||| | |
Sbjct 140024 CGTGATGAGGGCTTGCACACAGACTTTGCCTGCTTGCTGCACTCTCAC-TTG---AAGCA 139969
Query 58152 CCGACGCGGGATCGC-----ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATG 58206
|||| || | || ||| | ||||| || || || ||| | ||||| | |
Sbjct 139968 CCGA-GCCAGCAAGCAGATGATCCAACAGATTATTACAGATGCTGTCACCATCGAGCAAG 139910
Query 58207 AGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAA 58266
||||| | || || || | || || | || || ||||| ||||||
Sbjct 139909 AGTTTCTGACTGAGGCTTTGCCATGTGCTCTACTGGGCATGAATGCCACATTGATGAAGC 139850
Query 58267 AGTACATTGAGTTTGTTGCCGACAGACT----TTTGCTCGAACTGATTGGAGAGCGTCAT 58322
|||||||||||||||| ||||| | || |||||| | | |||| ||
Sbjct 139849 AGTACATTGAGTTTGTGGCCGATCGCCTGCTCGTTGCTCTTGGTAA--CGAGAAGGT--G 139794
Query 58323 TACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAAC 58382
|| || ||| ||||| ||||| || ||| | ||||| | | |||||||||||
Sbjct 139793 TATAAGACGGCCAATCCTTTTGACTTCATGGAGAACATCTCATTGGGCGGCAAGACAAAT 139734
Query 58383 TTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414
|| || || || |||| | || ||||| ||
Sbjct 139733 TTCTTTGAGAAGCGAGTTGGTGAGTATCAGAA 139702
>seq245
Length=42083
Score = 96.9 bits (106), Expect = 3e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| || || || || ||||||||| |||| || || |
Sbjct 31650 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTCGAGGTGGAGTCT 31709
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| |||| | ||||| | || ||||||||| ||| | || || |||
Sbjct 31710 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 31769
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || || || |||||||| ||| | || ||
Sbjct 31770 CAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGA 31807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445762566408960
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