Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq203 159 5e-34
seq60 111 2e-19
>seq203
Length=54532
Score = 159 bits (176), Expect = 5e-34
Identities = 460/703 (65%), Gaps = 10/703 (1%)
Strand=Plus/Plus
Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071
|| || ||||| | || ||||||| | ||| || |||| | | || || |||||
Sbjct 7256 CCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTTCTTTTCGACACGCTTCATG 7315
Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
|| ||||| |||||||||||||| | |||||||| | | || ||| || || ||
Sbjct 7316 AAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGGACTTCTTCCTTACCG 7375
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
|||||| | ||| |||||| | | | ||| ||||| || |||||||| |||
Sbjct 7376 TGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTGCCAAGGCTCCAAGTAAATG 7435
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | ||||| || ||||| || ||||| || | ||||| || ||||| || ||
Sbjct 7436 GCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAAA 7495
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|| | | ||| ||||| | ||||||||| || || ||||| || | || || |||
Sbjct 7496 ACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGTGCCTGCAATGTAAGAGCCA 7555
Query 66312 CTTGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369
| || |||||| | ||| | || || || || || ||||| || ||||| | |
Sbjct 7556 GTGGCGCGAATACGGTGGACATTCA-AG-CCGATACCACCAGCCATCTTGGAGATCATGG 7613
Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429
|||| || | ||| ||||||||||| || || || || ||| |||||| || || |
Sbjct 7614 CGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTCCTTCATGTCAACGAGGA 7673
Query 66430 AACAGCTAGACATTTGGTGAC---GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 66486
||| |||| | |||| || || || || || || | || || || || |
Sbjct 7674 ---AGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTTGAAGAGTGTGGGCGAGGCAT 7730
Query 66487 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 66546
| ||||| ||| || | |||| ||| || || | || || |||| |
Sbjct 7731 GTGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGACTCGCTCAATATTGTCTC 7790
Query 66547 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 66606
|| || || || |||||||| | |||||| || || | || || |||||| ||
Sbjct 7791 CCCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCCGCTCGACAATCTTGCCGT 7850
Query 66607 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 66666
| | ||| | | || || || ||||| || || ||||| || | ||| ||||
Sbjct 7851 TGAGTTTGAGAAGATATGACCGCTCTAAAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGT 7910
Query 66667 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 66709
||| || || | ||| | |||| ||||| ||| | | |||
Sbjct 7911 CTCTGTCATAGACAATGGCGGAGTCGAGTTCCTCCCTGTGTTT 7953
>seq60
Length=156840
Score = 111 bits (122), Expect = 2e-19
Identities = 290/440 (66%), Gaps = 8/440 (2%)
Strand=Plus/Plus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|| || || ||||| || || || || || ||||| || || || | ||||| || ||
Sbjct 139702 TTCTGATACTCACCAACTCGCTTCTCAAAGAAATTTGTCTTGCCGCCCAATGAGATGTTC 139761
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986
|||||||| || || |||||| ||||| | || | || | || | |
Sbjct 139762 TCCATGAAGTCAAAAGGATTGGCCGTCTTATACACCTTCTCGTTACCAAGAGCAACGAGC 139821
Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046
| | ||| || ||||| || || || ||||||| | |||||| || | ||
Sbjct 139822 AGGCGATCGGCCACAAACTCAATGTACTGCTTCATCAATGTGGCATTCATGCCCAGTAGA 139881
Query 36047 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 36106
| ||| | |||| |||| ||||| ||||| || || | ||| || ||||| |||||
Sbjct 139882 GCACATGGCAAAGCCTCAGTCAGAAACTCTTGCTCGATGGTGACAGCATCTGTAATAATC 139941
Query 36107 GAT---ATTA-CTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 36162
| || | ||| || | ||||||| | | | | || || ||| || ||
Sbjct 139942 TGTTGGATCATCTGCTTGCTGGCTCGGTGCTTCAAGTGAGAGTG----CAGCAAGCAGGC 139997
Query 36163 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 36222
|| || ||| | ||||| || | |||||||||||||| || ||||| |||||
Sbjct 139998 AAAGTCTGTGTGCAAGCCCTCATCACGCGAGATTAATTCGTTGGAGAAGGTGAGACCGGG 140057
Query 36223 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 36282
||| | ||||||||| || ||||| || || || ||||| | || |||||||| ||
Sbjct 140058 CATCAAGCCACGCTTCTTCAGCCAGAAGATAGAAGCAAAAGCACCGCTGAAGAAAATACC 140117
Query 36283 TTCTACTGCCGCAAAGGCAA 36302
||| || || ||||| ||||
Sbjct 140118 TTCCACAGCAGCAAAAGCAA 140137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658167139713920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |