Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq60 102 6e-17 >seq60 Length=156840 Score = 102 bits (112), Expect = 6e-17 Identities = 133/179 (74%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 23005 CTACTTGGTATGAATAGTGACAGT-ATGAGACTGTACATACAGTTTGTTGCAGATCGCCT 23063 ||||| || |||||| | ||| | |||| | |||||| ||||||| || |||||||| Sbjct 139880 CTACTGGGCATGAAT-GCCACATTGATGAAGCAGTACATTGAGTTTGTGGCCGATCGCCT 139822 Query 23064 GCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATCCATTTGATTTCATGGA 23123 ||||| ||| || ||| | | ||| ||||||| |||||||| ||||| |||||||| Sbjct 139821 GCTCGTTGCTCTTGGTAACGAGAAGGTGTATAAGACGGCCAATCCTTTTGACTTCATGGA 139762 Query 23124 TAACATTAGCATT-GAAGGTAAAACAAACTTCTTTGAACGCCGTGTGAGTGAATATCAG 23181 |||| | |||| | || || ||||| |||||||| || || |||| |||||| Sbjct 139761 GAACA-TCTCATTGGGCGGCAAGACAAATTTCTTTGAGAAGCGAGTTGGTGAGTATCAG 139704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356230612981264