Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq203 185 1e-41 >seq203 Length=54532 Score = 185 bits (204), Expect = 1e-41 Identities = 1308/2080 (63%), Gaps = 59/2080 (3%) Strand=Plus/Plus Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767 || ||||| ||||| || || || |||| || | || ||| || | |||||||| || Sbjct 6064 CTGGTCCACGGTGAACTGGATAGGTGCGGCAGCAGCTTGCGTGCGCAAGTAGTACATGCC 6123 Query 78768 CGTTTTTAGACCGAGACTCCATCC-GTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826 ||| || ||||| || |||| || ||| || ||||| || | ||| | | Sbjct 6124 CGTCTTGAGACCTAGCTTCCAGCCAGTA-AAGTGCATGGAAGTGATCTTGCCCATGGTGG 6182 Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886 |||| || || || || | ||||| || || ||||| || || | ||| |||| Sbjct 6183 GATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACCACGGTCAGCAG 6242 Query 78887 CCATTTTTATGATCGTCTT-TTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945 |||| | | || ||| | ||| | ||||||||||| |||||| || | || ||| Sbjct 6243 CCATCTGCACGA-CGTGTCGTTGAGAAATTTCCCAAACAGTTTTGTAGAGAGCTTTGATA 6301 Query 78946 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002 || | || | || | | |||||||| || || || || || || | |||||| Sbjct 6302 TCGGCCGGGATATTGGGGATGTTCTGAATAGAACCGTTCTCGGCAATGATACGATTCTTC 6361 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062 ||| | ||| ||| | | ||| | | || | || || ||||| || || Sbjct 6362 ATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGCCAGGGATTGACAACC 6421 Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 || ||||| || | || || | || |||||| || || || || || | | Sbjct 6422 TGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAAGGCTCGAAGCAC 6481 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 ||||| || |||| ||| |||| || || ||||| ||||| || || | || || Sbjct 6482 TCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCGAGCAGCAATGAG 6541 Query 79183 TTTCTAAGACCGTATGATC--TGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAG 79240 || | || || ||| || |||| | || || || ||||| ||||| || |||| Sbjct 6542 TTGCGAATCCC--ATGCTCCTTGATCTGCTCCTTGAGGCTATCCCACTCCCAGAGGTCAG 6599 Query 79241 ACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGT 79300 | || || | ||| | || | || || || || | ||| || || || Sbjct 6600 AAGGCTTCACGTCCCACATGTCGAACTGAAGGATGCCCTCCGAGGCGGGAGAGCCCTTGA 6659 Query 79301 ATGTTTCATAAGGTCC---TTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGT 79357 | || | || || || |||||| ||| ||||| | || | || | | Sbjct 6660 AAGTGGCGTAGGGCCCCTGTTCCTT---GGCCAATTCGAGAGAGGCAGTGAGGGCAGCAT 6716 Query 79358 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTA-TCAAATGGA 79416 ||||||||| || || |||| ||| ||||| || | ||||| ||| | || ||||| Sbjct 6717 GATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTC-AGGTGACTCGAATGGC 6775 Query 79417 TAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 79476 ||| || || ||||| || | || || || |||| ||| ||||||| ||| Sbjct 6776 ATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAATAGGTCGGTGT 6835 Query 79477 CTCTTATTAGAAATTTCAG--CTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 79534 | | | || | |||| | || ||||| || || | || | ||| || ||| | | Sbjct 6836 CGCATGTT-GCTGTTTCGGGCCTCCTGGACGGGG-TAGTGGTTGACATCAATGATTCTGT 6893 Query 79535 TGAGATTCCTGACTATTACTT---TGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC 79591 | || || | || | || | ||||| || | || || | || || | |||| Sbjct 6894 TCAGGTTACGAACAACGACCTGCGTGACC---TCGTGAAGCTTCTGGAAGTCGTAGCGTC 6950 Query 79592 CATC----TATT--ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCT 79645 | || || | ||||| | || || | ||| |||| || || || || |||| Sbjct 6951 CCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATACAGCGACCT 7010 Query 79646 CATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTA 79705 ||| || | | || | || ||||| ||||||||||| | || ||||| | Sbjct 7011 CATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGATTGTTCCCA 7070 Query 79706 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAG 79765 | || | ||||| |||||| ||||||| |||||||| || || ||||| ||| |||| | Sbjct 7071 AGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGGATTACCCG 7130 Query 79766 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGT 79825 | || |||| | ||| | || | | ||||| | || | | | || | | Sbjct 7131 TCTCGGTCTGGGCTTCCAGGATGGAGTACCAGA-GCTTCTGGGCACGA--ATGGTCGCAC 7187 Query 79826 ATCTCTTT---TCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACAT 79882 | ||| || | || || | ||| | || ||||| || || | | Sbjct 7188 GACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCCTCGCCGTAGCAGT 7247 Query 79883 CGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--AC 79940 | | | || || ||||||| || ||||||| | ||| || || | || ||| || Sbjct 7248 CAGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGT--TCTTTTCGAC 7305 Query 79941 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTC 80000 || ||||| || ||||| |||||||||||||| | |||| ||| | | || || Sbjct 7306 ACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGGACTTC 7365 Query 80001 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 80060 || || || |||||| | ||| |||||| | | | ||| | ||||| || || Sbjct 7366 TTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTGCCAAGGCTC 7425 Query 80061 CAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 80120 |||||| ||||| | | || ||||| ||||| || ||||| || | ||||| || || Sbjct 7426 CAAGTAAATGGCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCTGGCAGT 7485 Query 80121 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGAT 80180 ||| || |||| | | ||| ||||| | ||||||||| || || ||||| || | || Sbjct 7486 GTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGTGCCTGCAAT 7545 Query 80181 ATAGCTTCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 80238 || ||| |||| |||||| | ||| | || || || || || ||||| || Sbjct 7546 GTAAGAGCCAGTGGCGCGAATACGGTGGACATTCA-AG-CCGATACCACCAGCCATCTTG 7603 Query 80239 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATG 80298 ||||| | ||||| || | ||| ||||||||||| || ||||| || || ||||| Sbjct 7604 GAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTCCTTCATG 7663 Query 80299 TTAAGTAGAAAACAGCTAGACATTTGGTGAC---GACTAGTTCCCGCATTAAATAAGGTA 80355 | || || | ||| |||| | |||| || || || || || || | || Sbjct 7664 TCAACGAGGA---AGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTTGAAGAGTGTG 7720 Query 80356 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 80415 || || || || ||||| ||| |||| |||| ||| || || | || || Sbjct 7721 GGCGAGGCATGTGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGACTCGCTCA 7780 Query 80416 ATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACG 80475 |||| | || || || || |||||||| | |||||| || || | || || Sbjct 7781 ATATTGTCTCCCCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCCGCTCGACA 7840 Query 80476 ATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 80535 |||||| || | ||| | | || || || ||||| || || ||||| || | | Sbjct 7841 ATCTTGCCGTTGAGTTTGAGAAGATATGACCGCTCTAAAGTCTTGAAGCCAAAGTACTGG 7900 Query 80536 TATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 80595 || ||||||| || || | ||| | |||| ||||| ||| | | ||| | || Sbjct 7901 TAGTTGAAGTCTCTGTCATAGACAATGGCGGAGTCGAGTTCCTCCCTGTGTTTCATGACG 7960 Query 80596 ACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 80655 || || |||| || || || ||| | || || |||||||| || Sbjct 7961 CACTCGTATGTCTCCTTTGAGATCATTGGCGAAGCACGGTCGTTCTTGGGATTAACGTAA 8020 Query 80656 TTGAATAAATC-CT-CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTG 80713 | ||||||| || || || | || || | || || || | |||||| || || | Sbjct 8021 TGATATAAATCGCTGACAACAGCTGAC--CATTGCTTCTTGGTCTGCTTGTGCAGGTTGG 8078 Query 80714 ATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 | ||||| || | ||| || | || |||||||| ||||| Sbjct 8079 AGACGGCAATACGGGCCGCAAGGATAGCATAATCGGGATG 8118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718262622888320