Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq60 87.8 2e-12
>seq60
Length=156840
Score = 87.8 bits (96), Expect = 2e-12
Identities = 175/259 (68%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 14170 tttCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACC 14229
|||| ||||| ||||| ||||| ||||| || || |||||||| | ||| || |
Sbjct 140350 TTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAAAAGCAACGAGCCTCAGGGA 140409
Query 14230 ATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTG 14289
||| ||||| | || | || |||| || || || || || || || ||| |
Sbjct 140410 CTTGGACTTCACCGCTGAAGCGCTCAACCAAGTTCTCGTTGACGATGCCGTCGGAAGCAG 140469
Query 14290 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTTTTTTCC 14346
|||||||||||| ||||| || ||||||| ||| |||| || | | || ||||
Sbjct 140470 CAAAAAATGCCAGTATGTGGGAGATGAAGTATTTCTCGTCATCATTCAGACGATTGTTCC 140529
Query 14347 AATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTT 14406
| ||| ||||| || || ||||| | || || | ||||| || ||| | || |
Sbjct 140530 AGTCGTGCAAATCTTTTGACAGATCGATCTCTTCGGCCGTCCAGAAGGAAGCCTCGGCCT 140589
Query 14407 TTTTATACATTACCCATAT 14425
|||| |||||| ||| ||
Sbjct 140590 TTTTGTACATTTGCCAGAT 140608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479723874339200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |