Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq203 156 6e-33
seq60 132 6e-26
>seq203
Length=54532
Score = 156 bits (172), Expect = 6e-33
Identities = 902/1423 (63%), Gaps = 42/1423 (3%)
Strand=Plus/Plus
Query 71438 CATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATG 71497
||| ||||||||| || || |||| ||| ||||| || | ||||| || || ||||
Sbjct 6714 CATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGACTCGAATG 6773
Query 71498 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGT 71557
| ||| || || ||||| || | || || ||||||| ||| ||||||| ||
Sbjct 6774 GCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAATAGGTCGGT 6833
Query 71558 GTCTCTTATTAGAAATTTCAG--CTTCTGGAATAGGATAATAATTAATATCTATAATTTT 71615
||| | | || | |||| | || ||||| || || | || | ||| || ||| |
Sbjct 6834 GTCGCATGTT-GCTGTTTCGGGCCTCCTGGACGGGG-TAGTGGTTGACATCAATGATTCT 6891
Query 71616 ATTGAGATTTCTGACTATTACTT---TGACCACATCCTTTAGTTTGAGAAAATCAAATCT 71672
|| || || | || | || | ||||| || | || || | || || | |
Sbjct 6892 GTTCAGGTTACGAACAACGACCTGCGTGACC---TCGTGAAGCTTCTGGAAGTCGTAGCG 6948
Query 71673 CCCATC----TATT--ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTAC 71726
|| || || | ||||| || || || | ||| |||| || || || || ||
Sbjct 6949 TCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATACAGCGAC 7008
Query 71727 CTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCC 71786
||||| || | | || | |||||||| ||||| || || | ||| |||||
Sbjct 7009 CTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGATTGTTCC 7068
Query 71787 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACC 71846
|| || | ||||| |||||| ||||||| |||||||| || || || || ||| ||||
Sbjct 7069 CAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGGATTACC 7128
Query 71847 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTT 71906
|| || |||| | ||| | || | | ||||| | || | | | || ||
Sbjct 7129 CGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGA-GCTTCTGGGCACGA--ATGGTCGC 7185
Query 71907 GTATCTCTTT---TCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGC 71963
| ||| || | || || | ||| | || ||||| || || | ||
Sbjct 7186 ACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCCTCGCCGTA-GC 7244
Query 71964 ATTGT-CTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT- 72021
| | | | || || ||||| || || ||||||| | ||| || || | || |||
Sbjct 7245 AGTCAGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGT--TCTTTTC 7302
Query 72022 -ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 72080
|| || ||||| || ||||| |||||||||||||| | |||| ||| | | ||
Sbjct 7303 GACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGGAC 7362
Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140
|| || || || |||||| | ||| |||||| | | | ||| | ||||| ||
Sbjct 7363 TTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTGCCAAGG 7422
Query 72141 TTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 72200
|||||||| ||||| | | || || || ||||| || ||||| || | ||||| ||
Sbjct 7423 CTCCAAGTAAATGGCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCTGGC 7482
Query 72201 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 72260
||||| || |||| | | ||| ||||| | ||||||||| | || ||||| || |
Sbjct 7483 AGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGTGCCTGC 7542
Query 72261 GATATAGCTTCCACTGGCACGAATA--TTGCTAATTGATAGACCTATTCCCCCTGCCATT 72318
|| || ||| |||| |||||| || ||| | || || || || || |||||
Sbjct 7543 AATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCA-AG-CCGATACCACCAGCCATC 7600
Query 72319 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 72378
|| ||||| | ||||| || | ||| ||||||||||| || || || || ||| ||
Sbjct 7601 TTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTCCTTC 7660
Query 72379 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC---GACTAGTTCCCGCATTAAATAAG 72435
|||| || || | ||| |||| | |||| || || || || || || |
Sbjct 7661 ATGTCAACGAGGA---AGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTTGAAGAGT 7717
Query 72436 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGAT 72495
|| || || || || ||||| ||| |||| |||| ||| || || | ||
Sbjct 7718 GTGGGCGAGGCATGTGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGACTCGC 7777
Query 72496 TCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCA 72555
|| |||| | || || || || |||||||| | ||| || || || | ||
Sbjct 7778 TCAATATTGTCTCCCCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCCGCTCG 7837
Query 72556 ACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 72615
|| |||||| || | ||| | | || || || ||||| || || ||||| ||
Sbjct 7838 ACAATCTTGCCGTTGAGTTTGAGAAGATATGACCGCTCTAAAGTCTTGAAGCCAAAGTAC 7897
Query 72616 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTA 72675
| ||| ||||||| || || | ||| | || | ||||| ||| | | ||| |
Sbjct 7898 TGGTAGTTGAAGTCTCTGTCATAGACAATGGCGGAGTCGAGTTCCTCCCTGTGTTTCATG 7957
Query 72676 ACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 72735
|| || || |||| || || || ||| | || || ||||||||
Sbjct 7958 ACGCACTCGTATGTCTCCTTTGAGATCATTGGCGAAGCACGGTCGTTCTTGGGATTAACG 8017
Query 72736 TAGTTGAATAAATC-CT-CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGAT 72793
|| | ||||||| || || || | || || | || || || | |||||| || |
Sbjct 8018 TAATGATATAAATCGCTGACAACAGCTGAC--CATTGCTTCTTGGTCTGCTTGTGCAGGT 8075
Query 72794 TTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
| || ||||| || | ||| || || || |||||||| |||||
Sbjct 8076 TGGAGACGGCAATACGGGCCGCAAGGATAGCATAATCGGGATG 8118
Score = 84.2 bits (92), Expect = 3e-11
Identities = 300/466 (64%), Gaps = 5/466 (1%)
Strand=Plus/Plus
Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCC 70850
|| ||||| || ||||| || || | || || |||| ||| || | |||||||||||
Sbjct 6064 CTGGTCCACGGTGAACTGGATAGGTGCGGCAGCAGCTTGCGTGCGCAAGTAGTACATGCC 6123
Query 70851 TGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGG 70910
|| || ||||| || |||| || ||| ||||| || | ||| | | ||
Sbjct 6124 CGTCTTGAGACCTAGCTTCCAGCCAGTAAAGTGCATGGAAGTGATCTTGCCCATGGTGGG 6183
Query 70911 ATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 70970
||| |||||||| || | || || || || ||||| || || | ||| |||||
Sbjct 6184 ATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACCACGGTCAGCAGC 6243
Query 70971 CATTTTTATGATCGTCT-TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 71029
||| | | || ||| | ||| | ||||||||||| |||||| || | || ||||
Sbjct 6244 CATCTGCACGA-CGTGTCGTTGAGAAATTTCCCAAACAGTTTTGTAGAGAGCTTTGATAT 6302
Query 71030 CTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGA 71086
| | || | || | | |||||||| || || || ||||| || | ||| || |
Sbjct 6303 CGGCCGGGATATTGGGGATGTTCTGAATAGAACCGTTCTCGGCAATGATACGATTCTTCA 6362
Query 71087 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTT 71146
|| | ||| ||| | | ||| | | || | || || ||||| || || |
Sbjct 6363 TCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGCCAGGGATTGACAACCT 6422
Query 71147 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACT 71206
| ||||| || | || || | || |||||| || || || || || | |||
Sbjct 6423 GGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAAGGCTCGAAGCACT 6482
Query 71207 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 71252
|||| || |||| ||| |||| || || || || ||||| || ||
Sbjct 6483 CATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGC 6528
>seq60
Length=156840
Score = 132 bits (146), Expect = 6e-26
Identities = 295/441 (67%), Gaps = 10/441 (2%)
Strand=Plus/Plus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|| || || ||||| || || || || || ||||| ||||| || ||||||| || ||
Sbjct 139702 TTCTGATACTCACCAACTCGCTTCTCAAAGAAATTTGTCTTGCCGCCCAATGAGATGTTC 139761
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893
|||||||| ||||| ||||||| ||||| | || | || | || | |
Sbjct 139762 TCCATGAAGTCAAAAGGATTGGCCGTCTTATACACCTTCTCGTTACCAAGAGCAACGAGC 139821
Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953
| | ||| || | || || || || ||||||| | |||||| || | ||
Sbjct 139822 AGGCGATCGGCCACAAACTCAATGTACTGCTTCATCAATGTGGCATTCATGCCCAGTAGA 139881
Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013
| ||| | |||| |||| ||||| ||||| || || | ||| || ||||| |||||
Sbjct 139882 GCACATGGCAAAGCCTCAGTCAGAAACTCTTGCTCGATGGTGACAGCATCTGTAATAATC 139941
Query 42014 -----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATG 42068
|||| | ||| || | ||||||| | | | | || || ||| || |
Sbjct 139942 TGTTGGATCAT-CTGCTTGCTGGCTCGGTGCTTCAAGTGAGAGTG----CAGCAAGCAGG 139996
Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128
| || || ||||| |||||||| | |||||||||||||| || ||||| ||||
Sbjct 139997 CAAAGTCTGTGTGCAAGCCCTCATCACGCGAGATTAATTCGTTGGAGAAGGTGAGACCGG 140056
Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTC 42188
|||| | ||||||||| || ||||| || ||||| ||||| | || ||||| || |
Sbjct 140057 GCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAAGCAAAAGCACCGCTGAAGAAAATAC 140116
Query 42189 CTTCTACTGCCGCAAAGGCAA 42209
|||| || || ||||| ||||
Sbjct 140117 CTTCCACAGCAGCAAAAGCAA 140137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671133428202880
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