Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq60 165 1e-35 seq203 158 2e-33 >seq60 Length=156840 Score = 165 bits (182), Expect = 1e-35 Identities = 205/274 (75%), Gaps = 14/274 (5%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||||||||| |||| ||||| ||||||| ||||||| |||||||| Sbjct 140608 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACGGCCGAAGAGATCGATCTG 140549 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || || || || |||| ||| | | |||| ||| ||| ||| | | || || || Sbjct 140548 TCAAAAGATTTGCACGACTGGAACAATCGTCTGAATGATGACGAGAAATACTTCATCTCC 140489 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAA-TCTGTTGACACG 125197 ||||| |||| || ||||| | ||||| || ||||||||||| || | ||||| || Sbjct 140488 CACATACTGGCATTTTTTGCTGCTTCCGACGGCATCGTCAACGAGAACTTGGTTGA-GCG 140430 Query 125198 ATTCTCTCAAGAGTTGA---CCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAAT 125251 ||| || | ||| ||| | || |||| ||| ||||||||||||||||| || Sbjct 140429 CTTC-----AGCGGTGAAGTCCAAGTCCCTGAGG-CTCGTTGCTTTTACGGATTCCAGAT 140376 Query 125252 CATGATTGAGAACGTGCACTCGGAAATGTACTCT 125285 |||||| |||||| | |||||||||| |||||| Sbjct 140375 CATGATGGAGAACATCCACTCGGAAACATACTCT 140342 >seq203 Length=54532 Score = 158 bits (174), Expect = 2e-33 Identities = 315/460 (68%), Gaps = 10/460 (2%) Strand=Plus/Minus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 |||| ||| ||||| ||||| || || || || || | ||| | |||||||| |||| Sbjct 7478 GATATGTTGACCAGGGTGGCAACAAGCGACCTGGTGCATTTGCCATTTACTTGGAGCCTT 7419 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||||| || || ||||| || | || |||| || ||| || ||||| | | Sbjct 7418 GGCACGCCGATGTGTTTGAGTTCCTTGATTTGCGAAAGAACCACGGTAAGGAAGAAGTCC 7359 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---A 97041 |||| | || || || ||| || ||| | || ||| | ||||||||||| ||| | Sbjct 7358 GAGCTCGTGATTTATTCCTTGCTCTTTGGATTCCCGATCTTTTCATGAAGCGTGTCGAAA 7299 Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101 | |||||| | |||| || ||||||||| || | ||||| ||| | || |||| Sbjct 7298 AGAACGGTG---ATTGGACTCTGATGTGCCCCAACGAATGCCCCGGCCTGGCTGACTGCT 7242 Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGA 97160 ||||| ||||||||||| || | || |||| |||||| | |||| || Sbjct 7241 ACGGCGAGGAGTTTGAGGCTCTCTATGAGAAGTATGAGCGTGAGGGCAAGGGTCGTGCGA 7182 Query 97161 CGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219 | | ||| ||| | |||| || ||| | ||||| || || ||| ||||| || | Sbjct 7181 CCATTCG-TGC-CCAGAAGCTCTGGTACTCCATCCTGGAAGCCCAGACCGAGACGGGTAA 7124 Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279 ||| | ||| |||||||||||| || || | || ||||| || ||||||| || Sbjct 7123 TCCTTTCATGCTCTACAAGGATGCCTGTAACAGAAAGAGCAATCAGAAGAACTTGGGAAC 7064 Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||| ||||||| || |||||||||||| | |||||| Sbjct 7063 AATCCGCAGCTCCAACCTCTGCACGGAAATTATCGAGTAC 7024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741052826890880