Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq60 96.9 3e-15
>seq60
Length=156840
Score = 96.9 bits (106), Expect = 3e-15
Identities = 173/251 (69%), Gaps = 5/251 (2%)
Strand=Plus/Plus
Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508
|||| || || || || |||||| || ||||| || ||||| || | |||||| | |
Sbjct 140350 TTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAAAAGCAACGAGCCTCAGGGA 140409
Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568
| || ||||| | || | || | ||||| ||||| || || ||||| |||||
Sbjct 140410 CTTGGACTTCACCGCTGAAGCGCTCAACCAAGTTCTCGTTGACGATGCCGTCGGAAGCAG 140469
Query 13569 CaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTT----TTCTGACAACTTTAAC 13624
||||||| || |||||||| || || | ||| |||| ||| ||| | | | |
Sbjct 140470 CAAAAAATGCCAGTATGTGGGAGATGAAGTATTTCTCGTCATCATTCAGACGATTGTT-C 140528
Query 13625 CAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCC 13684
|| || | ||||||||||| | ||| | ||| || | ||||| || ||||| | |||
Sbjct 140529 CAGTCGTGCAAATCTTTTGACAGATCGATCTCTTCGGCCGTCCAGAAGGAAGCCTCGGCC 140588
Query 13685 TTCTTATACAT 13695
|| || |||||
Sbjct 140589 TTTTTGTACAT 140599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430978786212576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |