Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 161 2e-35
seq321 156 7e-34
>seq1
Length=703770
Score = 161 bits (178), Expect = 2e-35
Identities = 201/270 (74%), Gaps = 4/270 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || ||||||||||| ||||||||||| |||||
Sbjct 113575 GCCAAGCGTCACCGTAAGAT-TCTTCGCGACAACATCCAAGGCATCACCAAGCCCGCTAT 113633
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|| ||||| || ||||||||||| ||||| ||| | |||| || |||| || || |
Sbjct 113634 TCGACGTCTCGCCCGTCGTGGTGGTGTCAAACGTATTTCTGCTATGATCTACGAGGAAAC 113693
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCG 16610
|| |||| | |||| || ||| || ||| || | ||| ||| || || || || |
Sbjct 113694 GCGCACTGTTCTTAAGACATTTCTCGAGGGCGTCATTCGTGACGCTGTTACA-TACACAG 113752
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || || ||||| ||||| ||| | ||| |||| || || || || |||||||
Sbjct 113753 AACACGCCAAGCGAAAGACAGTCACATCCCTTGATGTCGTATACGCCTTAAAGCGTCAAG 113812
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||||| | || || ||||| | ||||
Sbjct 113813 GCCGTACACTATACGGCTTTGGTGGCTAAT 113842
>seq321
Length=25032
Score = 156 bits (172), Expect = 7e-34
Identities = 197/268 (74%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || || || || || ||||| ||||| |||||
Sbjct 576 GCCAAGCGTCACCGTAAGAT-TCTTCGTGACAATATTCAGGGTATCACAAAGCCCGCTAT 634
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| |||||||||||||| ||||||||| | |||| || |||| || ||||
Sbjct 635 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCGATGATCTACGAGGAGAC 694
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| |||| | || | ||||||| || || || | ||||| || ||| |||||
Sbjct 695 CCGCACTGTTCTCAAAACCTTCCTCGAGGGTGTCATTCGGGATGCCGTCACCTACACCGA 754
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || || ||||||||||| || | || | ||||| || |||| || |||||
Sbjct 755 ACACGCCAAGCGCAAGACTGTCACTTCTCTCGACGTTGTCTACGCTCTGAAGCGACAAGG 814
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||||| | || || || || |||||
Sbjct 815 CCGTACCCTGTACGGCTTCGGTGGTTAA 842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074570956784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |