Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq203 158 2e-33
>seq203
Length=54532
Score = 158 bits (174), Expect = 2e-33
Identities = 562/870 (65%), Gaps = 14/870 (2%)
Strand=Plus/Plus
Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227
|| || ||||| | || ||||||| | ||| || |||| | | || || |||||
Sbjct 7256 CCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTTCTTTTCGACACGCTTCATG 7315
Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287
|| ||||| |||||||||||||| | |||| ||| | | || ||| || || ||
Sbjct 7316 AAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGGACTTCTTCCTTACCG 7375
Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347
|||||| | ||| |||||| | | | ||| | ||||| || |||||||| |||
Sbjct 7376 TGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTGCCAAGGCTCCAAGTAAATG 7435
Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407
|| | | ||||| || ||||| || ||||| || | ||||| || ||||| || ||
Sbjct 7436 GCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAAA 7495
Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467
|| | | ||| ||||| | ||| || || | || ||||| || | || || |||
Sbjct 7496 ACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGTGCCTGCAATGTAAGAGCCA 7555
Query 63468 CTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525
|||| |||||| | ||| | || || || || || ||||| || ||||| | |
Sbjct 7556 GTGGCGCGAATACGGTGGACATTCA-AG-CCGATACCACCAGCCATCTTGGAGATCATGG 7613
Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585
|||| || | |||||||||||| || || ||||| || || |||||| || || |
Sbjct 7614 CGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTCCTTCATGTCAACGAGGA 7673
Query 63586 AACAGCTAGACATTTGGTGAC---GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63642
||| |||| | |||| || || || || || || | || || || || |
Sbjct 7674 ---AGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTTGAAGAGTGTGGGCGAGGCAT 7730
Query 63643 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63702
| ||||| ||| || | |||| ||| || || | || || |||| |
Sbjct 7731 GTGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGACTCGCTCAATATTGTCTC 7790
Query 63703 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 63762
|| || || || |||||||| | |||||| || || | || || |||||| ||
Sbjct 7791 CCCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCCGCTCGACAATCTTGCCGT 7850
Query 63763 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63822
| | ||| | | || || || ||||| || || ||||| || | ||| ||||
Sbjct 7851 TGAGTTTGAGAAGATATGACCGCTCTAAAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGT 7910
Query 63823 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGG 63882
||| || || | ||| | |||| ||||| ||| | | ||| | || || |
Sbjct 7911 CTCTGTCATAGACAATGGCGGAGTCGAGTTCCTCCCTGTGTTTCATGACGCACTCGTATG 7970
Query 63883 TGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAAT 63942
| |||| || || || ||| | || || |||||||| || | ||||||
Sbjct 7971 TCTCCTTTGAGATCATTGGCGAAGCACGGTCGTTCTTGGGATTAACGTAATGATATAAAT 8030
Query 63943 C-CT-CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 64000
| || || || | || || | || || || | |||||| || || || ||||| ||
Sbjct 8031 CGCTGACAACAGCTGAC--CATTGCTTCTTGGTCTGCTTGTGCAGGTTGGAGACGGCAAT 8088
Query 64001 TCTGGCGGCTAGAATGGCATAATCCGGATG 64030
| ||| || || || |||||||| |||||
Sbjct 8089 ACGGGCCGCAAGGATAGCATAATCGGGATG 8118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622941842654080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |