Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq203 381 2e-100
>seq203
Length=54532
Score = 381 bits (422), Expect = 2e-100
Identities = 1077/1631 (66%), Gaps = 36/1631 (2%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || || ||| |||| ||| | | ||| ||||| || | | | ||| |||| |||
Sbjct 7737 TTTACACATGCCTCGCCCACACTCTTCAACGCTGGCACACCTCAATGTCAGCTGTCGTCT 7678
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | |||||||| || |||||| || |||| |||||| || ||||
Sbjct 7677 TGCTTCCTCGTTGACATGAAGGAGGACAGCATCGAAGGCATCTATGACACGCTCAAGACC 7618
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTG 363724
|| || | || ||||||| || || || || || || || ||||| | |||| |
Sbjct 7617 TGCGCCATGATCTCCAAGATGGCTGGTGGTATCGGCTTGAATG--TCCACCGTATTCGCG 7560
Query 363725 C-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783
| || | | ||||||| ||||| || || ||||| | |||||||||||
Sbjct 7559 CCACTGG-CTCTTACATTGCAGGCACCAACGGCACGTCCAATGGTGTCATTCCCATGCTT 7501
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
||||| || |||| ||||| || || || ||||||||||| ||||| || ||
Sbjct 7500 CGTGTTTTCAACAACACTGCCAGATATGTTGACCAGGGTGGCAACAAGCGACCTGGTGCA 7441
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903
||||| || || | |||||| || |||||| | |||||||| ||||| | || ||
Sbjct 7440 TTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTGTTTGAGTTCCTTGATTTGCGAAAG 7381
Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963
||| || || || ||| | || || |||||| | ||| ||| |||||| || | ||
Sbjct 7380 AACCACGGTAAGGAAGAAGTCCGAGCTCGTGATTTATTCCTTGCTCTTTGGATTCCCGAT 7321
Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAAT 364021
| ||| |||||||| || || | | | | ||||| | || | ||||| ||||||
Sbjct 7320 CTTTTCATGAAGCGTGTCGA--AAAGAACGGTGATTGGACTCTGATGTGCCCCAACGAAT 7263
Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081
| || || || | || | || || || | || ||||| || || ||||||||
Sbjct 7262 GCCCCGGCCTGGCTGACTGCTACGGCGAGGAGTTTGAGGCTCTCTATGAGAAGTATGAGC 7203
Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141
||||| |||| |||| ||| |||| || |||||||| |||| ||||| ||||
Sbjct 7202 GTGAGGGCAAGGGTCGTGCGACCATTCGTGCCCAGAAGCTCTGGTACTCCATCCTGGAAG 7143
Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201
| |||| ||||| || | || | ||| | ||||| ||| | || ||| | ||| ||
Sbjct 7142 CCCAGACCGAGACGGGTAATCCTTTCATGCTCTACAAGGATGCCTGTAACAGAAAGAGCA 7083
Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260
| ||| || || | || |||| || |||| |||||| || || || ||||| || |||
Sbjct 7082 ATCAGAAGAACTTGGGAACAA-TCCGCAGCTCCAACCTCTGCACGGAAATTATCGAGTAC 7024
Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319
| || || || ||| || ||||| ||| | || || | || || || || |||||
Sbjct 7023 TCTGCCCCTGATGAGGTCGCTGTATGCAACTTGGCCTCTCTGGCTCTGCCCGCCTTTGTT 6964
Query 364320 -----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374
|| || || | ||| |||| | ||| | || || || | | | |
Sbjct 6963 GACTACAACGAGGGACGCTACGACTTCCAGAAGCTTCACGAGGTCACGCAGGTCGTTGTT 6904
Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAG-CCGAGCGTTC 364433
| || || ||| | || || || | || || | | || | |||| |
Sbjct 6903 CGTAACCTGAACAGAATCATTGATGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGC 6844
Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493
|| ||||| || || || |||||| |||| || ||||| |||||||||| ||| | |
Sbjct 6843 -AACATGCGACACCGACCTATTGGTGTTGGCGTCCAGGGTCTCGCTGACGCTTTCCT--T 6787
Query 364494 GC--TCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551
|| | ||| |||| || || ||||| || |||| || || ||| |||| |||||
Sbjct 6786 GCCTTGCGCATGCCATTCGAGTCACCTGAAGCCCGTGAGCTCAACAAGCAGATATTTGAG 6727
Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAA--AACCAAGGGAAAGT 364609
|| || ||| ||| || | ||||| || || ||||| || ||| |||| |
Sbjct 6726 ACCATTTATCATGCTGCCCTCACTGCCTCTCTCGAATTGGCCAAGGAAC--AGGGGCCCT 6669
Query 364610 ACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATG 364669
|| | |||| |||| || || ||| |||| | | ||||| || | ||| | |
Sbjct 6668 ACGCCACTTTCAAGGGCTCTCCCGCCTCGGAGGGCATCCTTCAGTTCGACATGTGGGACG 6609
Query 364670 TCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGT 364728
| | ||| |||| || ||| | ||||||| || | | | | | ||| |||||||
Sbjct 6608 TGAAGCCTTCTGACCTCTGGGAGTGGGATAGCCTCAAGGAGC-AGATCAAGGAGCATGGG 6550
Query 364729 ACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGA 364788
| ||||||||| | | || |||||||| ||||||||||| | ||||| || ||
Sbjct 6549 ATTCGCAACTCATTGCTGCTCGCCCCCATGCCTACGGCTTCTACCTCTCAGATTCTGGGT 6490
Query 364789 AACAACGAGTGCTTCGAACCGTTTACAAG--CAATCTTTATTCACGCCGGGTTCTTTCCG 364846
||||| ||||||||||| || ||||| | ||| |||| ||||| || || | |
Sbjct 6489 AACAATGAGTGCTTCGAGCC--TTACACGTCCAACATTTACCAGCGCCGTGTCCTGGCAG 6432
Query 364847 GAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGG 364906
| ||||| | ||| || ||| | ||| |||| ||||| |||| || || |||
Sbjct 6431 GTGAATTCCAGGTTGTCAATCCCTGGCTACTCAAAGATCTCGTCGACATGGGCCTTTGGT 6372
Query 364907 GTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGAT 364966
||| |||||||| |||||| |||| || |||||| | |||||||| ||
Sbjct 6371 CTGATGCGATGAAGAATCGTATCATTGCCGAGAACGGTTCTATTCAGAACATCCCCAATA 6312
Query 364967 TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCA 365026
| || | ||| | || || | |||||||| || ||||||||||| ||| ||
Sbjct 6311 TCCCGGCCGATATCAAAGCTCTCTACAAAACTGTTTGGGAAATTTCTCAACGACACGTCG 6252
Query 365027 TTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086
| | ||||| || || || |||||||| || ||| ||| || | ||| | ||
Sbjct 6251 TGCAGATGGCTGCTGACCGTGGTGCTTTCATTGACCAGTCCCAATCCCTCAACATTCACA 6192
Query 365087 TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTAC-GGGTGGAAATCCGGT 365145
||| | || ||| | |||| | || |||||||| || ||| || ||||| |||
Sbjct 6191 TGAAGGATCCCACCATGGGCAAGATCACTTCCATGCACTT-TACTGGCTGGAAGCTAGGT 6133
Query 365146 CTTAAGACAGG 365156
|| ||||| ||
Sbjct 6132 CTCAAGACGGG 6122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303342110938016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |