Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq203 381 2e-100 >seq203 Length=54532 Score = 381 bits (422), Expect = 2e-100 Identities = 1077/1631 (66%), Gaps = 36/1631 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || || ||| |||| ||| | | ||| ||||| || | | | ||| |||| ||| Sbjct 7737 TTTACACATGCCTCGCCCACACTCTTCAACGCTGGCACACCTCAATGTCAGCTGTCGTCT 7678 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || |||||| || |||| |||||| || |||| Sbjct 7677 TGCTTCCTCGTTGACATGAAGGAGGACAGCATCGAAGGCATCTATGACACGCTCAAGACC 7618 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTG 363724 || || | || ||||||| || || || || || || || ||||| | |||| | Sbjct 7617 TGCGCCATGATCTCCAAGATGGCTGGTGGTATCGGCTTGAATG--TCCACCGTATTCGCG 7560 Query 363725 C-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 | || | | ||||||| ||||| || || ||||| | ||||||||||| Sbjct 7559 CCACTGG-CTCTTACATTGCAGGCACCAACGGCACGTCCAATGGTGTCATTCCCATGCTT 7501 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| || |||| ||||| || || || ||||||||||| ||||| || || Sbjct 7500 CGTGTTTTCAACAACACTGCCAGATATGTTGACCAGGGTGGCAACAAGCGACCTGGTGCA 7441 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| || || | |||||| || |||||| | |||||||| ||||| | || || Sbjct 7440 TTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTGTTTGAGTTCCTTGATTTGCGAAAG 7381 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || || ||| | || || |||||| | ||| ||| |||||| || | || Sbjct 7380 AACCACGGTAAGGAAGAAGTCCGAGCTCGTGATTTATTCCTTGCTCTTTGGATTCCCGAT 7321 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAAT 364021 | ||| |||||||| || || | | | | ||||| | || | ||||| |||||| Sbjct 7320 CTTTTCATGAAGCGTGTCGA--AAAGAACGGTGATTGGACTCTGATGTGCCCCAACGAAT 7263 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || || || | || | || || || | || ||||| || || |||||||| Sbjct 7262 GCCCCGGCCTGGCTGACTGCTACGGCGAGGAGTTTGAGGCTCTCTATGAGAAGTATGAGC 7203 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 ||||| |||| |||| ||| |||| || |||||||| |||| ||||| |||| Sbjct 7202 GTGAGGGCAAGGGTCGTGCGACCATTCGTGCCCAGAAGCTCTGGTACTCCATCCTGGAAG 7143 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | |||| ||||| || | || | ||| | ||||| ||| | || ||| | ||| || Sbjct 7142 CCCAGACCGAGACGGGTAATCCTTTCATGCTCTACAAGGATGCCTGTAACAGAAAGAGCA 7083 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260 | ||| || || | || |||| || |||| |||||| || || || ||||| || ||| Sbjct 7082 ATCAGAAGAACTTGGGAACAA-TCCGCAGCTCCAACCTCTGCACGGAAATTATCGAGTAC 7024 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319 | || || || ||| || ||||| ||| | || || | || || || || ||||| Sbjct 7023 TCTGCCCCTGATGAGGTCGCTGTATGCAACTTGGCCTCTCTGGCTCTGCCCGCCTTTGTT 6964 Query 364320 -----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374 || || || | ||| |||| | ||| | || || || | | | | Sbjct 6963 GACTACAACGAGGGACGCTACGACTTCCAGAAGCTTCACGAGGTCACGCAGGTCGTTGTT 6904 Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAG-CCGAGCGTTC 364433 | || || ||| | || || || | || || | | || | |||| | Sbjct 6903 CGTAACCTGAACAGAATCATTGATGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGC 6844 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 || ||||| || || || |||||| |||| || ||||| |||||||||| ||| | | Sbjct 6843 -AACATGCGACACCGACCTATTGGTGTTGGCGTCCAGGGTCTCGCTGACGCTTTCCT--T 6787 Query 364494 GC--TCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551 || | ||| |||| || || ||||| || |||| || || ||| |||| ||||| Sbjct 6786 GCCTTGCGCATGCCATTCGAGTCACCTGAAGCCCGTGAGCTCAACAAGCAGATATTTGAG 6727 Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAA--AACCAAGGGAAAGT 364609 || || ||| ||| || | ||||| || || ||||| || ||| |||| | Sbjct 6726 ACCATTTATCATGCTGCCCTCACTGCCTCTCTCGAATTGGCCAAGGAAC--AGGGGCCCT 6669 Query 364610 ACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATG 364669 || | |||| |||| || || ||| |||| | | ||||| || | ||| | | Sbjct 6668 ACGCCACTTTCAAGGGCTCTCCCGCCTCGGAGGGCATCCTTCAGTTCGACATGTGGGACG 6609 Query 364670 TCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGT 364728 | | ||| |||| || ||| | ||||||| || | | | | | ||| ||||||| Sbjct 6608 TGAAGCCTTCTGACCTCTGGGAGTGGGATAGCCTCAAGGAGC-AGATCAAGGAGCATGGG 6550 Query 364729 ACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGA 364788 | ||||||||| | | || |||||||| ||||||||||| | ||||| || || Sbjct 6549 ATTCGCAACTCATTGCTGCTCGCCCCCATGCCTACGGCTTCTACCTCTCAGATTCTGGGT 6490 Query 364789 AACAACGAGTGCTTCGAACCGTTTACAAG--CAATCTTTATTCACGCCGGGTTCTTTCCG 364846 ||||| ||||||||||| || ||||| | ||| |||| ||||| || || | | Sbjct 6489 AACAATGAGTGCTTCGAGCC--TTACACGTCCAACATTTACCAGCGCCGTGTCCTGGCAG 6432 Query 364847 GAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGG 364906 | ||||| | ||| || ||| | ||| |||| ||||| |||| || || ||| Sbjct 6431 GTGAATTCCAGGTTGTCAATCCCTGGCTACTCAAAGATCTCGTCGACATGGGCCTTTGGT 6372 Query 364907 GTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGAT 364966 ||| |||||||| |||||| |||| || |||||| | |||||||| || Sbjct 6371 CTGATGCGATGAAGAATCGTATCATTGCCGAGAACGGTTCTATTCAGAACATCCCCAATA 6312 Query 364967 TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCA 365026 | || | ||| | || || | |||||||| || ||||||||||| ||| || Sbjct 6311 TCCCGGCCGATATCAAAGCTCTCTACAAAACTGTTTGGGAAATTTCTCAACGACACGTCG 6252 Query 365027 TTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086 | | ||||| || || || |||||||| || ||| ||| || | ||| | || Sbjct 6251 TGCAGATGGCTGCTGACCGTGGTGCTTTCATTGACCAGTCCCAATCCCTCAACATTCACA 6192 Query 365087 TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTAC-GGGTGGAAATCCGGT 365145 ||| | || ||| | |||| | || |||||||| || ||| || ||||| ||| Sbjct 6191 TGAAGGATCCCACCATGGGCAAGATCACTTCCATGCACTT-TACTGGCTGGAAGCTAGGT 6133 Query 365146 CTTAAGACAGG 365156 || ||||| || Sbjct 6132 CTCAAGACGGG 6122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303342110938016