Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq60 104 2e-17
seq303 82.4 7e-11
>seq60
Length=156840
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104593 TATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATA 104652
|| || || ||||| || ||||| ||||| |||||||| ||| || || || | |||
Sbjct 139708 TACTCACCAACTCGCTTCTCAAAGAAATTTGTCTTGCCGCCCAATGAGATGTTCTCCATG 139767
Query 104653 AATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGA 104712
|| || |||||||| |||||| | || |||| ||||| | | | ||| |||
Sbjct 139768 AAGTCAAAAGGATTGGCCGTCTTATACACCTTCTCGTTACCAAGAGCAACGAGCAGGCGA 139827
Query 104713 TCCGCCACAAATTCGATGTACTCGCACATAGAATGTG-CATTCATGCCCAGCATTGCGAC 104771
|| |||||||| || ||||||| ||| |||||| ||||||||||||| | ||
Sbjct 139828 TCGGCCACAAACTCAATGTACTGCTTCATC-AATGTGGCATTCATGCCCAGTAGAGCACA 139886
Query 104772 GGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATG 104805
|| ||||| | ||| | ||| |||| |||||||
Sbjct 139887 TGGCAAAGCCTCAGTCAGAAACTCTTGCTCGATG 139920
>seq303
Length=27345
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || ||||| | || || || | || || | || |||||| |
Sbjct 10976 ATGCAAATTTTCGTCAAAACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCT 11035
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| |||||| ||||| || || || || |||||||||
Sbjct 11036 GACACCATCGACAATGTCAAGACCAAGATTCAGGACAAGGAGGGGATCCCCCCCGATCAA 11095
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | | || ||||| || || || | | | | | || || || |||
Sbjct 11096 CAGCGTCTGATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCAGACTACAAC 11155
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200
||||| || || ||||| ||||| | |||
Sbjct 11156 ATTCAGAAGGAGTCTACTCTTCATCTTGTG 11185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429932394986640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |