Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq203 205 9e-48 seq245 122 8e-23 seq303 111 1e-19 >seq203 Length=54532 Score = 205 bits (226), Expect = 9e-48 Identities = 928/1444 (64%), Gaps = 39/1444 (3%) Strand=Plus/Plus Query 145056 GATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGG 145115 ||||||| ||||| || || || |||| ||||| ||| || | ||| |||||| | | Sbjct 6411 GATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAAG 6470 Query 145116 GTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCA 145175 | || || |||| || || ||||| || |||| ||| | || || |||||| || | Sbjct 6471 GCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCGA 6530 Query 145176 CCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 || ||||| ||||| | || |||| |||||| | ||||| || || |||| |||| Sbjct 6531 GCAGCAATGAGTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCACTCCC 6590 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGG-G 145294 | || || ||| ||||||||||||||||| |||| | |||||||| |||||| | Sbjct 6591 AGAGGTCAGAAGGCTTCACGTCCCACATGTCGAACTGAAGGATGCCCTCCGAGGCGGGAG 6650 Query 145295 CTGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCA 145352 ||||||||| | ||| | ||| ||| ||||| | ||| | || | Sbjct 6651 AGCCCTTGAAAGTGGC-GTA--GGGCCCCTGTTCCTTGGCCAATTCGAGAGAGGCAGTGA 6707 Query 145353 GAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCT 145412 | || | |||||| ||||| || ||| |||||||| |||||| || Sbjct 6708 GGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGACT 6767 Query 145413 CGTACGGCATGCGCA--GCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470 || | |||||||||| ||| | ||||| || ||||| ||||| | || || || || Sbjct 6768 CGAATGGCATGCGCAAGGCA--AGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAAT 6825 Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530 || || ||| ||||||||| | | ||| || || || || | || || || Sbjct 6826 AGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAAT 6885 Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590 ||| | |||| ||| || || || |||| || | | | | ||| | ||||| | Sbjct 6886 GATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTA 6945 Query 145591 CCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGC 145650 || |||||| | | ||| || | || | || ||||| || || || || Sbjct 6946 GCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATACAGC 7005 Query 145651 CGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGT 145710 ||| || | | | ||| | | || || | ||| | ||| | ||| || Sbjct 7006 GACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGATTGT 7065 Query 145711 TCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCC 145770 ||||| || | |||||| || || ||||| || || ||||||||||||||| | || Sbjct 7066 TCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGGATT 7125 Query 145771 GCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAG---TCCTGCGCACGCACCTG 145827 || ||||| ||| | |||| ||| | || | || | ||| ||||| | || Sbjct 7126 ACCCGTCTCGGTCTGGGCTTCCAGGATGGA---GTACCAGAGCTTCTGGGCACGAA--TG 7180 Query 145828 CT-GCTGGTAGC-GGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885 | || | | |||||| || || ||| ||||| |||||||| | ||| Sbjct 7181 GTCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCCTCGCCG 7240 Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945 ||||| || | ||||||||| || | |||||| |||||||| | ||| | ||||| Sbjct 7241 TAGCAGTCAGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTTCTTT 7300 Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTG 146005 | ||| |||| ||| || | ||| || | ||| || || | || || || ||| | Sbjct 7301 TCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGG 7360 Query 146006 CAATCCTCAGCACCCATGTTTCGCT-TCAAATTAAGCACACT-ATAGATGTCCGCGTGCC 146063 || || | || || ||| | ||||| ||| | ||| | | | || ||||||| Sbjct 7361 ACTTCTTCCTTA-CCGTGGTTCTTTCGCAAATCAAGGA-ACTCAAACACATCGGCGTGCC 7418 Query 146064 ACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGAC 146120 | || || | || | ||| | || || ||| |||||||||||||| || | | Sbjct 7419 AAGGCTCCAAGTAAATGGCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATC 7478 Query 146121 GTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAG 146180 | ||||||| || || || | |||||| ||| || ||| |||||| || | Sbjct 7479 TGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGT-G 7537 Query 146181 AGTTTATTCT-GGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCC 146238 | | | | | ||| || ||| | | || ||||||| ||||| ||| || ||| Sbjct 7538 CCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACCACCAGCC 7597 Query 146239 GTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--G 146296 | |||||| || ||||||| |||||| || |||||||| || ||||| || Sbjct 7598 AT-CTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTC 7656 Query 146297 CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCAT--CGGCGTCCCCGCCGAGA 146354 |||| ||| | | || ||||| || ||| || | ||| || || || || || Sbjct 7657 CTTC--ATGTCAACGAGGAAGCAAGACGACAGCT--GACATTGAGGTGTGCCAGCGTTGA 7712 Query 146355 ACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATAG 146414 | | || || || || ||||| | ||| | | ||| | | || ||||| | Sbjct 7713 AGAGTGTGGGCGAGGCATGTGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGA 7772 Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474 | | ||| | ||| || || || | ||| || ||||| | |||||||||||||| Sbjct 7773 CTCGCTCAATATTGTCTCCCCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCC 7832 Query 146475 GCTC 146478 |||| Sbjct 7833 GCTC 7836 >seq245 Length=42083 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||||| || || | || |||||| || |||||||| ||| | Sbjct 31879 CCACCACGCAGGCGCAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGCC 31820 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||| | |||||||||||||| || Sbjct 31819 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGGGGA 31760 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 31759 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 31700 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || |||||||||||||| Sbjct 31699 TCGAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 31653 >seq303 Length=27345 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | ||| | || |||||||| ||||||||||| || Sbjct 11202 CCACCACGGAGGCGGAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCG 11143 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || || |||| | |||||| || || || ||| Sbjct 11142 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGTTGATCGGGGGGG 11083 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||||| Sbjct 11082 ATCCCCTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATGGTGTCAGATGACTCGACC 11023 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | || | ||| || ||||| || ||||| |||||||| ||||||| Sbjct 11022 TCAAGAGTGATGGTCTTGCCGGTAAGGGTTTTGACGAAAATTTGCATGA 10974 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || | ||| | || |||||||| || |||||||||||| | || || Sbjct 11479 CGGAGAACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCA 11420 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || |||||||| || ||| | || | |||||||||||| |||||||| ||||| || Sbjct 11419 TCTTCCAGCTGCTTACCAGCGAAAATCAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTA 11360 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || || || || | | || | ||||| | ||||| | |||| ||| | | Sbjct 11359 TCTTGAATCTTGGTTTTCACGTTGTCGATGGTATCAGAAGACTCCACCTCGAGGGTGATG 11300 Query 131200 GTTTTACCGGTTAGAGTTTTTACGA 131224 || || ||||| | ||| || |||| Sbjct 11299 GTCTTTCCGGTCAAAGTCTTGACGA 11275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008740689920