Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq203 205 9e-48
seq245 122 8e-23
seq303 111 1e-19
>seq203
Length=54532
Score = 205 bits (226), Expect = 9e-48
Identities = 928/1444 (64%), Gaps = 39/1444 (3%)
Strand=Plus/Plus
Query 145056 GATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGG 145115
||||||| ||||| || || || |||| ||||| ||| || | ||| |||||| | |
Sbjct 6411 GATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAAG 6470
Query 145116 GTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCA 145175
| || || |||| || || ||||| || |||| ||| | || || |||||| || |
Sbjct 6471 GCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCGA 6530
Query 145176 CCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235
|| ||||| ||||| | || |||| |||||| | ||||| || || |||| ||||
Sbjct 6531 GCAGCAATGAGTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCACTCCC 6590
Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGG-G 145294
| || || ||| ||||||||||||||||| |||| | |||||||| |||||| |
Sbjct 6591 AGAGGTCAGAAGGCTTCACGTCCCACATGTCGAACTGAAGGATGCCCTCCGAGGCGGGAG 6650
Query 145295 CTGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCA 145352
||||||||| | ||| | ||| ||| ||||| | ||| | || |
Sbjct 6651 AGCCCTTGAAAGTGGC-GTA--GGGCCCCTGTTCCTTGGCCAATTCGAGAGAGGCAGTGA 6707
Query 145353 GAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCT 145412
| || | |||||| ||||| || ||| |||||||| |||||| ||
Sbjct 6708 GGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGACT 6767
Query 145413 CGTACGGCATGCGCA--GCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470
|| | |||||||||| ||| | ||||| || ||||| ||||| | || || || ||
Sbjct 6768 CGAATGGCATGCGCAAGGCA--AGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAAT 6825
Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530
|| || ||| ||||||||| | | ||| || || || || | || || ||
Sbjct 6826 AGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAAT 6885
Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590
||| | |||| ||| || || || |||| || | | | | ||| | ||||| |
Sbjct 6886 GATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTA 6945
Query 145591 CCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGC 145650
|| |||||| | | ||| || | || | || ||||| || || || ||
Sbjct 6946 GCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATACAGC 7005
Query 145651 CGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGT 145710
||| || | | | ||| | | || || | ||| | ||| | ||| ||
Sbjct 7006 GACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGATTGT 7065
Query 145711 TCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCC 145770
||||| || | |||||| || || ||||| || || ||||||||||||||| | ||
Sbjct 7066 TCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGGATT 7125
Query 145771 GCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAG---TCCTGCGCACGCACCTG 145827
|| ||||| ||| | |||| ||| | || | || | ||| ||||| | ||
Sbjct 7126 ACCCGTCTCGGTCTGGGCTTCCAGGATGGA---GTACCAGAGCTTCTGGGCACGAA--TG 7180
Query 145828 CT-GCTGGTAGC-GGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885
| || | | |||||| || || ||| ||||| |||||||| | |||
Sbjct 7181 GTCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCCTCGCCG 7240
Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945
||||| || | ||||||||| || | |||||| |||||||| | ||| | |||||
Sbjct 7241 TAGCAGTCAGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTTCTTT 7300
Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTG 146005
| ||| |||| ||| || | ||| || | ||| || || | || || || ||| |
Sbjct 7301 TCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGG 7360
Query 146006 CAATCCTCAGCACCCATGTTTCGCT-TCAAATTAAGCACACT-ATAGATGTCCGCGTGCC 146063
|| || | || || ||| | ||||| ||| | ||| | | | || |||||||
Sbjct 7361 ACTTCTTCCTTA-CCGTGGTTCTTTCGCAAATCAAGGA-ACTCAAACACATCGGCGTGCC 7418
Query 146064 ACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGAC 146120
| || || | || | ||| | || || ||| |||||||||||||| || | |
Sbjct 7419 AAGGCTCCAAGTAAATGGCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATC 7478
Query 146121 GTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAG 146180
| ||||||| || || || | |||||| ||| || ||| |||||| || |
Sbjct 7479 TGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGT-G 7537
Query 146181 AGTTTATTCT-GGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCC 146238
| | | | | ||| || ||| | | || ||||||| ||||| ||| || |||
Sbjct 7538 CCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACCACCAGCC 7597
Query 146239 GTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--G 146296
| |||||| || ||||||| |||||| || |||||||| || ||||| ||
Sbjct 7598 AT-CTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTC 7656
Query 146297 CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCAT--CGGCGTCCCCGCCGAGA 146354
|||| ||| | | || ||||| || ||| || | ||| || || || || ||
Sbjct 7657 CTTC--ATGTCAACGAGGAAGCAAGACGACAGCT--GACATTGAGGTGTGCCAGCGTTGA 7712
Query 146355 ACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATAG 146414
| | || || || || ||||| | ||| | | ||| | | || ||||| |
Sbjct 7713 AGAGTGTGGGCGAGGCATGTGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGA 7772
Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474
| | ||| | ||| || || || | ||| || ||||| | ||||||||||||||
Sbjct 7773 CTCGCTCAATATTGTCTCCCCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCC 7832
Query 146475 GCTC 146478
||||
Sbjct 7833 GCTC 7836
>seq245
Length=42083
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||||| || || | || |||||| || |||||||| ||| |
Sbjct 31879 CCACCACGCAGGCGCAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGCC 31820
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| || |||| | |||||||||||||| ||
Sbjct 31819 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGGGGA 31760
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 31759 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 31700
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || || || || || || || ||||||||||||||
Sbjct 31699 TCGAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 31653
>seq303
Length=27345
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||| | ||| | || |||||||| ||||||||||| ||
Sbjct 11202 CCACCACGGAGGCGGAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCG 11143
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| |||||||| || || |||| | |||||| || || || |||
Sbjct 11142 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGTTGATCGGGGGGG 11083
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | || || | |||||||
Sbjct 11082 ATCCCCTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATGGTGTCAGATGACTCGACC 11023
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | || | ||| || ||||| || ||||| |||||||| |||||||
Sbjct 11022 TCAAGAGTGATGGTCTTGCCGGTAAGGGTTTTGACGAAAATTTGCATGA 10974
Score = 82.4 bits (90), Expect = 7e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
|| || || | ||| | || |||||||| || |||||||||||| | || ||
Sbjct 11479 CGGAGAACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCA 11420
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
|| || |||||||| || ||| | || | |||||||||||| |||||||| ||||| ||
Sbjct 11419 TCTTCCAGCTGCTTACCAGCGAAAATCAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTA 11360
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| || || || | | || | ||||| | ||||| | |||| ||| | |
Sbjct 11359 TCTTGAATCTTGGTTTTCACGTTGTCGATGGTATCAGAAGACTCCACCTCGAGGGTGATG 11300
Query 131200 GTTTTACCGGTTAGAGTTTTTACGA 131224
|| || ||||| | ||| || ||||
Sbjct 11299 GTCTTTCCGGTCAAAGTCTTGACGA 11275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472008740689920
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