Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq203 172 7e-38
seq60 120 4e-22
>seq203
Length=54532
Score = 172 bits (190), Expect = 7e-38
Identities = 466/708 (66%), Gaps = 10/708 (1%)
Strand=Plus/Plus
Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077
|||| || || ||||| | || ||||||| | ||| || |||| | | || || |
Sbjct 7251 CCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTTCTTTTCGACACGCT 7310
Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137
|||| || ||||| |||||||||||||| | |||| ||| | | || ||| || |
Sbjct 7311 TCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGGACTTCTTCCT 7370
Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197
| || |||||| | ||| |||||| | | | ||| | ||||| || |||||||
Sbjct 7371 TACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTGCCAAGGCTCCAAGT 7430
Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257
| ||||| | | ||||| || ||||| || ||||| || | ||||| || ||||| |
Sbjct 7431 AAATGGCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGT 7490
Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317
| |||| | | ||| ||||| | ||||||||| || || ||||| |||| || ||
Sbjct 7491 TGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGTGCCTGCAATGTAAG 7550
Query 63318 TTCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63375
||| |||| |||||| | ||| | || || || || || ||||| || |||||
Sbjct 7551 AGCCAGTGGCGCGAATACGGTGGACATTCA-AG-CCGATACCACCAGCCATCTTGGAGAT 7608
Query 63376 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 63435
| ||||| || | ||| ||||||||||| || || || || ||| |||||| ||
Sbjct 7609 CATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTCCTTCATGTCAAC 7668
Query 63436 TAGAAAACAGCTAGACATTTGGTGAC---GACTAGTTCCCGCATTAAATAAGGTAGGAGA 63492
|| | ||| |||| | |||| || || || || || || | || || ||
Sbjct 7669 GAGGA---AGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTTGAAGAGTGTGGGCGA 7725
Query 63493 AGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC 63552
|| || ||||| ||| || | |||| ||| || || | || || ||||
Sbjct 7726 GGCATGTGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGACTCGCTCAATATT 7785
Query 63553 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63612
| || || || || |||||||| | |||||| || || | || || |||||
Sbjct 7786 GTCTCCCCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCCGCTCGACAATCTT 7845
Query 63613 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 63672
| ||| | ||| | | || || || ||||| || || ||||| || | |||
Sbjct 7846 GCCGTTGAGTTTGAGAAGATATGACCGCTCTAAAGTCTTGAAGCCAAAGTACTGGTAGTT 7905
Query 63673 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63720
||||||| || || | ||| | |||| ||||| ||| | | |||
Sbjct 7906 GAAGTCTCTGTCATAGACAATGGCGGAGTCGAGTTCCTCCCTGTGTTT 7953
>seq60
Length=156840
Score = 120 bits (132), Expect = 4e-22
Identities = 292/441 (66%), Gaps = 10/441 (2%)
Strand=Plus/Plus
Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429
|| || || ||||| || || || || || ||||| || || || | ||||| || ||
Sbjct 139702 TTCTGATACTCACCAACTCGCTTCTCAAAGAAATTTGTCTTGCCGCCCAATGAGATGTTC 139761
Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489
|||||||| || || ||||||| ||||| | || | || | || | |
Sbjct 139762 TCCATGAAGTCAAAAGGATTGGCCGTCTTATACACCTTCTCGTTACCAAGAGCAACGAGC 139821
Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549
| | ||| || ||||| || || || ||||||| | |||||| || | ||
Sbjct 139822 AGGCGATCGGCCACAAACTCAATGTACTGCTTCATCAATGTGGCATTCATGCCCAGTAGA 139881
Query 32550 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 32609
| ||| | |||| |||| ||||| ||||| || || | ||| || ||||| |||||
Sbjct 139882 GCACATGGCAAAGCCTCAGTCAGAAACTCTTGCTCGATGGTGACAGCATCTGTAATAATC 139941
Query 32610 -----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATG 32664
|||| | ||| || | ||||||| | | | | || || ||| || |
Sbjct 139942 TGTTGGATCAT-CTGCTTGCTGGCTCGGTGCTTCAAGTGAGAGTG----CAGCAAGCAGG 139996
Query 32665 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 32724
| || || ||| | ||||| || | |||||||||||||| || ||||| ||||
Sbjct 139997 CAAAGTCTGTGTGCAAGCCCTCATCACGCGAGATTAATTCGTTGGAGAAGGTGAGACCGG 140056
Query 32725 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 32784
|||| | ||||||||| || ||||| || || || ||||| | || |||||||| |
Sbjct 140057 GCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAAGCAAAAGCACCGCTGAAGAAAATAC 140116
Query 32785 CTTCTACTGCCGCAAAGGCAA 32805
|||| || || ||||| ||||
Sbjct 140117 CTTCCACAGCAGCAAAAGCAA 140137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633626550764800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |