Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq203 232 1e-55
seq60 104 4e-17
>seq203
Length=54532
Score = 232 bits (256), Expect = 1e-55
Identities = 883/1365 (65%), Gaps = 57/1365 (4%)
Strand=Plus/Plus
Query 244091 TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGC 244150
|| || ||||| || || || | ||| || ||||||||||| | |||| || |||
Sbjct 6413 TTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAAGGC 6472
Query 244151 TCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACC 244210
|||| || ||| |||| ||||| ||||| | || || || |||||||| | | |
Sbjct 6473 TCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCGAGC 6532
Query 244211 AGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCAC 244270
|||| ||| | | || ||| || ||| | |||| | ||| |||||
Sbjct 6533 AGCAATGAGTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCACTCCCAG 6592
Query 244271 ATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTG 244330
| | | || ||| | || ||| |||||||||| ||||| || | |||| |
Sbjct 6593 AGGTCAGA-AGG-CTTCACGT-------CCCACATGTCGAACTGAAGGATGCCCTCCGAG 6643
Query 244331 ACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTC 244389
|||| ||||| | | || | |||||| || | || ||||| | | ||
Sbjct 6644 GCGGGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAGAGGCA 6703
Query 244390 GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCC 244449
|| |||||| || | || |||||||| || ||| |||||| | || ||||| |
Sbjct 6704 GT-GAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTT---- 6758
Query 244450 GCAGGTGA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504
||||||| | || |||| || | ||| |||| || || ||||| |||||
Sbjct 6759 -CAGGTGACTCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCA 6817
Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564
| || || |||| ||||||| ||||| | ||| || | |||||||| ||||
Sbjct 6818 ACACCAATAGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTG 6877
Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCA--TGCGGACGACGTCGGCCAGCAGCT 244622
| || || | |||| ||||| || | | |||| ||| ||| ||| ||
Sbjct 6878 ACATCAATGATTCTGTTCAGGTTACGAACAACGACCTGCGT--GACCTCGTGAAGCTTCT 6935
Query 244623 GAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGA 244682
| |||||||| ||| ||||| | | || | ||||| || || || |
Sbjct 6936 GGAAGTCGTAG-CGTC-----CCTCGTTG-TAGTCA-----ACAAAGGCGGGCAGAGCCA 6983
Query 244683 CGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGC 244742
||||| |||||| || || ||||| || | | | ||||| || ||| || ||||
Sbjct 6984 GAGAGGCCAAGTTGCATACAGCGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGC 7043
Query 244743 AGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGT 244802
||||||| || ||| || |||| || || |||||| ||| ||| ||||| |
Sbjct 7044 AGAGGTTGGAGCTGCGGATTGTTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCAT 7103
Query 244803 CCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGA 244862
|||||||||||||||| || || |||||| |||||| | |||| | || |||||
Sbjct 7104 CCTTGTAGAGCATGAAAGGATTACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGA 7163
Query 244863 GGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGG 244922
| | | || | ||| ||| |||||||||| ||| || || || |
Sbjct 7164 GCTTCTGGGCACGAATGGTCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAG 7223
Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAG 244980
|||| ||||| ||| || || | ||||||||||| || | |||||||| ||
Sbjct 7224 CCTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCGGGGCATTCGTTG--GGGCACATCAG 7281
Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040
| |||| || ||| | | ||| | || |||||| || ||||| ||||| || || |
Sbjct 7282 AGTCCAATCACCGTTCTTTTCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAG 7341
Query 245041 GAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAG 245098
||| | || | | ||| | || ||| || |||||| | || || | ||
Sbjct 7342 GAATAAATCAC--GAGCTCGGACTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAAC 7399
Query 245099 TCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTG 245158
||||| || ||| ||||||| ||||||| ||| | || | || || || |||||||||
Sbjct 7400 TCAAACACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAATGCACCAGGTCGCTTGTTG 7459
Query 245159 CCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGC 245216
|| ||||||| || ||| ||| | || | |||||| | || || | || | | |
Sbjct 7460 CCACCCTGGT-CAACAT-ATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACAC 7517
Query 245217 CGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGG 245276
| || || |||||||||||| ||||| | ||| || | | | | | | |||
Sbjct 7518 CATTGGACGTGCCGTTGGTGCCTGCAATGTAAGAGCCAGTGGC---GCGAATAC-GGTGG 7573
Query 245277 ACAT----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCT 245332
|||| ||| | || || || ||||||||| | ||||||| |||||| |||||
Sbjct 7574 ACATTCAAGCCGATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCA 7633
Query 245333 GCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGC 245392
||||| || ||||||||| |||||||| | || ||||| || ||||||||
Sbjct 7634 TAGATGCCTTCGATGCTGTCCTCCTTCATGTCAACGAGGAAGCAAGACGACAGCTGACAT 7693
Query 245393 TTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437
| || ||| | |||||| || ||||| ||| || ||||||
Sbjct 7694 TGAGGTGTGCCAGCGTTGAAGAGTGTGGGCGAGGCATGTGTAAAG 7738
>seq60
Length=156840
Score = 104 bits (114), Expect = 4e-17
Identities = 333/506 (66%), Gaps = 13/506 (3%)
Strand=Plus/Minus
Query 42645 AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGG 42704
|||||||| || ||||| || |||||| || || | | |||| | || |
Sbjct 140201 AAGAAGGCAGAATGGGCTATCCGCTGGATTCAGGACAAAGAATCCAGCTTCGCCCAGCGC 140142
Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764
|||| || ||| | || || || || || |||||| || || || || || ||||||
Sbjct 140141 TTGGTTGCTTTTGCTGCTGTGGAAGGTATTTTCTTCAGCGGTGCTTTTGCTTCTATCTTC 140082
Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
||||| ||| || | | ||||||||| ||||||||||| |||||| | ||| |
Sbjct 140081 TGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAACGAATTAATCTCGCGT 140022
Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA-CAA 42883
|| ||||| |||| | |||||||||||| | ||| ||| ||| | | ||| | |
Sbjct 140021 GATGAGGGCTTGCACACAGACTTTGCCTGCTTGCTGCACTC---TCACTTGAAGCACCGA 139965
Query 42884 GCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943
||| | ||| || | ||| || || || || || || |||||| | |||||
Sbjct 139964 GCCAGC-AAGCAGATGATCCAACAGATTATTACAGATGCTGTCACCATCGAGCAAGAGTT 139906
Query 42944 CCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAA--CCACGACCTCATGTGCAA 43000
|| || || | |||| ||| | || | |||||||| |||| | ||| |
Sbjct 139905 TCTGACTGAGGCTTTGCCATGTG-CTCTACTGGGCATGAATGCCAC--ATTGATGAAGCA 139849
Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACA 43059
|||||| ||| || ||||| | || || || | ||| || | | || |
Sbjct 139848 GTACATTGAGTTTGTGGCCGATCGCCTGCTCGTTGCTCTTGGTAACGAGAAG-GTGTATA 139790
Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119
| ||| | || || ||||| |||||||||||||| |||| |||||||| || || |
Sbjct 139789 AGACGGCCAATCCTTTTGACTTCATGGAGAACATCTCATTGGGCGGCAAGACAAATTTCT 139730
Query 43120 TCGAGAAGCGCGTCGCCGACTACCAG 43145
| |||||||| || | || || |||
Sbjct 139729 TTGAGAAGCGAGTTGGTGAGTATCAG 139704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944331078682880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |