Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq6 105 1e-17
>seq6
Length=466476
Score = 105 bits (116), Expect = 1e-17
Identities = 178/255 (70%), Gaps = 2/255 (1%)
Strand=Plus/Plus
Query 334107 TCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTC 334166
|||||| ||| ||| | || ||| | | ||| || ||||| || ||| || |||| ||
Sbjct 204503 TCAATGGTAGTCATTTCAGTATCAGCCGAGTCAAGGTCGTGCTCGACGAAAACAGTCTTG 204562
Query 334167 AAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGT 334225
| | || || ||| || ||||||| || | || ||||| ||||| |||||
Sbjct 204563 ACTTCGCTCTGCTT-GGGAAAACCTTCAACTTGCTCATTATTGATAGCTCGCATGAGAGT 204621
Query 334226 TGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAA 334285
|| || || | ||||| || |||||||||||||| || | |||||||||||| ||
Sbjct 204622 AGACTTTCCAGATCCGTTGGGACCACACAGACCGTAACGCTGACCACGCTTCAGACGCAA 204681
Query 334286 CCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAG 334345
| || | ||| |||||||| || | || || |||||||| || ||| | || ||
Sbjct 204682 GTGAGTTTGGTTGAGAAGAATCTTGGCGCCGTAAGCCAGAGAGAAGGTACAGTTGCAGAG 204741
Query 334346 ATCCTCACCGACTTC 334360
|||||| || ||||
Sbjct 204742 ATCCTCGCCCTCTTC 204756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102870278112800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |