Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq203 273 3e-68 >seq203 Length=54532 Score = 273 bits (302), Expect = 3e-68 Identities = 1121/1747 (64%), Gaps = 59/1747 (3%) Strand=Plus/Plus Query 113602 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTT 113661 ||||||||| ||||||||||| || |||||||| || | ||||| || | | ||| Sbjct 6112 GTAGTACATGCCCGTCTTGAGACCTAGCTTCCAGCCAGTAAAGTGCATGGAAGTGATCTT 6171 Query 113662 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 113721 | | || ||| | |||| | ||| | |||||| || || ||||| || Sbjct 6172 GCCCATGGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACC 6231 Query 113722 ACGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAG 113779 ||| || || ||||| | | || | || | || ||||||| |||||| ||||| Sbjct 6232 ACGGTCAGCAGCCATCTGCACGACGTG--TCGTTGAGAAATTTCCCAAACAGTTTTGTAG 6289 Query 113780 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACC 113839 || || ||||| | ||||||| ||| || || || || ||| || | | Sbjct 6290 AGAGCTTTGATATCGGCCGGGATATTGGGGATGTTCTGAATAGA---ACCGTTCTCGGCA 6346 Query 113840 ATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 113896 |||| ||| |||||| | | ||||| || || || | |||||| | | || Sbjct 6347 ATGATACGATTCTTCATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGC 6406 Query 113897 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 113956 ||||||||| || ||||| || ||| || | | | || || |||| |||| Sbjct 6407 CAGGGATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTG 6466 Query 113957 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGT 114016 || ||||| ||||||||||||||||||| || || | ||| || || || |||||||| Sbjct 6467 TAAGGCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGG 6526 Query 114017 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAG 114076 || | || | ||| || | || | ||| | || | ||||||||| ||||| Sbjct 6527 GCGAGCAGCAATGAGTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCAC 6586 Query 114077 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCT 114136 || || | | || | | | |||||| || ||||| ||||| || | ||||| Sbjct 6587 TCCCAGAGGTCAGAAGGCTTCACGTCCCACATGTCGAACTGAAGGATGCCCTCCGAGGCG 6646 Query 114137 GGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG-GAGCTCGCCTC 114195 || || |||| || || |||| || |||| ||| ||||||||| ||| || Sbjct 6647 GGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAG-AGGCAGT 6705 Query 114196 GAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGA 114255 |||||| || ||||| || |||||||| || | || | | ||| || || Sbjct 6706 GAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGA 6765 Query 114256 ATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 114315 || || | | || | || || | || |||||||| ||||| || | ||||| Sbjct 6766 CTCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAAT 6825 Query 114316 TGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGAT 114375 || || |||| ||| || ||||| || || ||||| || || ||| || Sbjct 6826 AGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAAT 6885 Query 114376 AACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA 114435 | || || || || || |||| |||| || |||||||| | | | || | Sbjct 6886 GATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTA 6945 Query 114436 ACTGCGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACAC 114492 ||| ||| | | | ||| | || || || | || |||| || || || Sbjct 6946 ---GCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATAC 7002 Query 114493 AGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAAT 114552 || | |||||| ||| |||||| ||||||||||| || | || || || || Sbjct 7003 AGCGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGAT 7062 Query 114553 GGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGG 114612 || ||||||||||| ||||| |||| ||||||| ||||||||||| |||||| | || Sbjct 7063 TGTTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGG 7122 Query 114613 CGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCAC-A 114670 | |||||||| || |||| | || || | | ||||| | || | ||||| | Sbjct 7123 ATTACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGAGCTTCTG-----GGCACGA 7177 Query 114671 GTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGCTTCAAACTCT 114724 ||| | || || |||| |||| ||| ||||| ||||| || |||||||| Sbjct 7178 ATGG---TCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCC 7234 Query 114725 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACC 114783 || || | || | || || || || || | ||||| | |||| ||| | ||| Sbjct 7235 TCGCCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATCACC 7293 Query 114784 ACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCG 114843 || || |||||||||||||| || || || ||||| ||||| ||| | ||| || Sbjct 7294 GTTCTTTTCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACG 7353 Query 114844 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 114903 | || ||||||| | || || || ||||| || | || || | | ||| || Sbjct 7354 AGCTCGGACTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGC 7413 Query 114904 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTT 114957 |||||| || |||| ||| | || | || || | | || ||| |||||| Sbjct 7414 GTGCCAAGGCTCCAAGTAAATGGCAAATGCACC---AGGTCGCTTGTTGCCACCCTGGTC 7470 Query 114958 TACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 115017 ||||| || || ||| || || || |||||||| ||||||| ||||| || ||| Sbjct 7471 AACATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCC 7530 Query 115018 ATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACC 115077 || || || ||| ||| | |||| | | | |||| | || || ||||| Sbjct 7531 GTTGGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACC 7590 Query 115078 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGA 115137 || ||| ||| ||||| ||||| | |||| || | ||||| || ||||| Sbjct 7591 ACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCT 7650 Query 115138 GTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT--GGTGTACCAGCG 115195 ||| |||| | | | |||||||| ||||| || | || ||||| |||||| Sbjct 7651 GTCCTCCTTCATGTCAACGAGGAAGCAAGACGACA--GCTGACATTGAGGTGTGCCAGCG 7708 Query 115196 TTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCT 115253 |||||||| || || | || || || | | | ||| |||||| || |||||| | Sbjct 7709 TTGAAGAGTGTGGGCGAGGCATG--TGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTT 7766 Query 115254 CCAAGAC---GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 115310 ||| ||| | | ||||| ||| | ||||||| | || ||||||| ||||| Sbjct 7767 CCAGGACTCGCTCAATATTGTCTCCCCAG---ATACCGACAGCAACACGCATAATCATGT 7823 Query 115311 ATTGGGG 115317 |||||| Sbjct 7824 GTTGGGG 7830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597348462759040