Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq203 156 4e-33
>seq203
Length=54532
Score = 156 bits (172), Expect = 4e-33
Identities = 939/1486 (63%), Gaps = 40/1486 (3%)
Strand=Plus/Minus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT- 93950
||| | || || || |||||||| || || || ||| |||| || || |||||
Sbjct 7728 GCCTCGCCCACACTCTTCAACGCTGGCACACCTCAATGTCAGCTGTCGTCTTGCTTCCTC 7669
Query 93951 GATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010
| |||| | |||| ||| |||| || || | |||| |||||| ||| || |
Sbjct 7668 GTTGAC-ATGAAGGAGGACAGCATCGAAGGCATCTATGACACGCTCAAGACCTGCGCCAT 7610
Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGT 94068
||||| || || || || ||||| | | ||||||| |||| || |||| ||
Sbjct 7609 GATCTCCAAGATGGCTGGTGGTATCGGCTTGAATGTCCAC--CGTATTCGCGCCACTGGC 7552
Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128
|| ||||| || ||||| ||||| ||||| || || | || ||||| || || |||
Sbjct 7551 TCTTACATTGCAGGCACCAACGGCACGTCCAATGGTGTCATTCCCATGCTTCGTGTTTTC 7492
Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188
|||||| | || | || || ||||||||||| | | | ||| | || || |
Sbjct 7491 AACAACACTGCCAGATATGTTGACCAGGGTGGCAACAAGCGACCTGGTGCATTTGCCATT 7432
Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248
|| | ||||| |||||||| || ||| | ||| | || ||||||||||||||||
Sbjct 7431 TACTTGGAGCCTTGGCACGCCGATGTGTTTGAGTTCCTTGATTTGCGAAAGAACCACGGT 7372
Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| || | | || | || | ||| ||||| ||| | || || ||||| |||
Sbjct 7371 AAGGAAGAAGTCCGAGCTCGTGATTTATTCCTTGCTCTTTGGATTCCCGATCTTTTCATG 7312
Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368
|| || ||||| || ||| | |||| ||| | || ||||| ||||| ||||| |||
Sbjct 7311 AAGCGTGTCGAAAAGAACGGTGATTGGACTCTGATGTGCCCCAACGAATGCCCCGGCCTG 7252
Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAG 94428
| ||| | || | ||||| | | |||| || || ||||||||
Sbjct 7251 GCTGACTGCTACGGCGAGGAGTTTGAGGCTCTCTATGAGAAGTATGAGCGTGAGGGCAAG 7192
Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488
| | | || ||| |||||| ||| | ||| |||| | ||| |||
Sbjct 7191 GGTCGTGCGACCATTCGTGCCCAGAAGCTCTGGTACTCCATCCTGGAAGCCCAGACCGAG 7132
Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547
||||||| || | ||| | | |||||| |||| ||| ||| ||| ||| || |
Sbjct 7131 ACGGGTAATCCTTTCATGCTCTACAAGGATGCCTGT-AACAGAAAGAGCAATCAGAAGAA 7073
Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607
| | || ||| ||||| || || ||||| || ||| ||||||| || | || ||
Sbjct 7072 CTTGGGAACAATCCGCAGCTCCAACCTCTGCACGGAAATTATCGAGTACTCTGCCCCTGA 7013
Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667
||| | ||||| || ||| ||| ||| | ||| || | || || || |||
Sbjct 7012 TGAGGTCGCTGTATGCAACTTGGCCTCTCTGGCTCTGCCCGCCTTTGT------TGACTA 6959
Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCG-GGAAGGATGGTCT 94726
|| | | | | | ||| | || ||||| | || || | | || ||
Sbjct 6958 CA--ACGAGGGACGC-TACGACTTCCAGAAGCTTCACGAGGTCACGCAGGTCGTTGTTCG 6902
Query 94727 TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786
| ||||||||||| | || || ||| ||||||||||| |||||| ||| |
Sbjct 6901 T-AACCTGAACAGAATCATTGATGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGCA 6843
Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846
|| || || || || || || | |||||||||||| |||| ||||| | |
Sbjct 6842 ACATGCGACACCGACCTATTGGTGTTGGCGTCCAGGGTCTCGCTGACGCTTTCCTTGCCT 6783
Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906
|||| |||| | ||| || || || | | || | | ||||| || | ||
Sbjct 6782 TGCGCATGCCATTCGAGTCACCTGAAGCCCGTGAGCTCAACAAGCAGATATTTGAGACCA 6723
Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACG 94966
||||| | | ||| | | || || | ||||||| ||| ||||| |||
Sbjct 6722 TTTATCATGCTGCCCTCACTGCCTCTCTCGAATTGGCCA---AGGAACAGGGGCCCTACG 6666
Query 94967 AATCGTTCCGCGGATCGC---CCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023
| ||| || || | ||| || ||||||| ||||||||||| | |||| |
Sbjct 6665 CCACTTTCAAGGGCTCTCCCGCCTCGG---AGGGCATCCTTCAGTTCGACATGTGGGACG 6609
Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGA-AG-CTCTACGCGCTGATGTTATCAAACACGG 95081
||||||| || | || | || ||||| || ||| | | || || | | | || ||
Sbjct 6608 TGAAGCCTTCTGACCTCTGGGAGTGGGATAGCCTCAAGGAGCAGA--TCAAGGAGCATGG 6551
Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141
| ||| | |||| | ||||||||||| ||||| || || | ||||| || ||
Sbjct 6550 GATTCGCAACTCATTGCTGCTCGCCCCCATGCCTACGGCTTCTACCTCTCAGATTCTGGG 6491
Query 95142 CAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGG 95201
||||| |||| ||||| || | ||| |||||| | ||| | | || || || || ||
Sbjct 6490 TAACAATGAGTGCTTCGAGCCTTACACGTCCAACATTTACCAGCGCCGTGTCCTGGCAGG 6431
Query 95202 GGAATTCCCCGTCATCAA---CAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGT 95257
||||||| || |||| | || ||| | || || | || | |||| | |
Sbjct 6430 TGAATTCCAGGTTGTCAATCCCTGGCTACTCAAA---GATCTCGTCGAC-ATGGGCCTTT 6375
Query 95258 GGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317
|| ||| | | ||||| | | | || ||||| || | |||||||||||
Sbjct 6374 GGTCTGATGCGATGAAGAATCGTATCATTGCCGAGAACGGTTCTATTCAGAACATCCCCA 6315
Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363
| || |||| || ||||| || |||||||| || || ||||| ||
Sbjct 6314 ATATCCCGGCCGATATCAAAGCTCTCTACAAAACTGTTTGGGAAAT 6269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494718945380480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |