Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq203 156 4e-33 >seq203 Length=54532 Score = 156 bits (172), Expect = 4e-33 Identities = 939/1486 (63%), Gaps = 40/1486 (3%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT- 93950 ||| | || || || |||||||| || || || ||| |||| || || ||||| Sbjct 7728 GCCTCGCCCACACTCTTCAACGCTGGCACACCTCAATGTCAGCTGTCGTCTTGCTTCCTC 7669 Query 93951 GATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 | |||| | |||| ||| |||| || || | |||| |||||| ||| || | Sbjct 7668 GTTGAC-ATGAAGGAGGACAGCATCGAAGGCATCTATGACACGCTCAAGACCTGCGCCAT 7610 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGT 94068 ||||| || || || || ||||| | | ||||||| |||| || |||| || Sbjct 7609 GATCTCCAAGATGGCTGGTGGTATCGGCTTGAATGTCCAC--CGTATTCGCGCCACTGGC 7552 Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 || ||||| || ||||| ||||| ||||| || || | || ||||| || || ||| Sbjct 7551 TCTTACATTGCAGGCACCAACGGCACGTCCAATGGTGTCATTCCCATGCTTCGTGTTTTC 7492 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 |||||| | || | || || ||||||||||| | | | ||| | || || | Sbjct 7491 AACAACACTGCCAGATATGTTGACCAGGGTGGCAACAAGCGACCTGGTGCATTTGCCATT 7432 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 || | ||||| |||||||| || ||| | ||| | || |||||||||||||||| Sbjct 7431 TACTTGGAGCCTTGGCACGCCGATGTGTTTGAGTTCCTTGATTTGCGAAAGAACCACGGT 7372 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || | | || | || | ||| ||||| ||| | || || ||||| ||| Sbjct 7371 AAGGAAGAAGTCCGAGCTCGTGATTTATTCCTTGCTCTTTGGATTCCCGATCTTTTCATG 7312 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 || || ||||| || ||| | |||| ||| | || ||||| ||||| ||||| ||| Sbjct 7311 AAGCGTGTCGAAAAGAACGGTGATTGGACTCTGATGTGCCCCAACGAATGCCCCGGCCTG 7252 Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAG 94428 | ||| | || | ||||| | | |||| || || |||||||| Sbjct 7251 GCTGACTGCTACGGCGAGGAGTTTGAGGCTCTCTATGAGAAGTATGAGCGTGAGGGCAAG 7192 Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 | | | || ||| |||||| ||| | ||| |||| | ||| ||| Sbjct 7191 GGTCGTGCGACCATTCGTGCCCAGAAGCTCTGGTACTCCATCCTGGAAGCCCAGACCGAG 7132 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||||||| || | ||| | | |||||| |||| ||| ||| ||| ||| || | Sbjct 7131 ACGGGTAATCCTTTCATGCTCTACAAGGATGCCTGT-AACAGAAAGAGCAATCAGAAGAA 7073 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 | | || ||| ||||| || || ||||| || ||| ||||||| || | || || Sbjct 7072 CTTGGGAACAATCCGCAGCTCCAACCTCTGCACGGAAATTATCGAGTACTCTGCCCCTGA 7013 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667 ||| | ||||| || ||| ||| ||| | ||| || | || || || ||| Sbjct 7012 TGAGGTCGCTGTATGCAACTTGGCCTCTCTGGCTCTGCCCGCCTTTGT------TGACTA 6959 Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCG-GGAAGGATGGTCT 94726 || | | | | | ||| | || ||||| | || || | | || || Sbjct 6958 CA--ACGAGGGACGC-TACGACTTCCAGAAGCTTCACGAGGTCACGCAGGTCGTTGTTCG 6902 Query 94727 TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786 | ||||||||||| | || || ||| ||||||||||| |||||| ||| | Sbjct 6901 T-AACCTGAACAGAATCATTGATGTCAACCACTACCCCGTCCAGGAGGCCCGAAACAGCA 6843 Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846 || || || || || || || | |||||||||||| |||| ||||| | | Sbjct 6842 ACATGCGACACCGACCTATTGGTGTTGGCGTCCAGGGTCTCGCTGACGCTTTCCTTGCCT 6783 Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906 |||| |||| | ||| || || || | | || | | ||||| || | || Sbjct 6782 TGCGCATGCCATTCGAGTCACCTGAAGCCCGTGAGCTCAACAAGCAGATATTTGAGACCA 6723 Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACG 94966 ||||| | | ||| | | || || | ||||||| ||| ||||| ||| Sbjct 6722 TTTATCATGCTGCCCTCACTGCCTCTCTCGAATTGGCCA---AGGAACAGGGGCCCTACG 6666 Query 94967 AATCGTTCCGCGGATCGC---CCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 | ||| || || | ||| || ||||||| ||||||||||| | |||| | Sbjct 6665 CCACTTTCAAGGGCTCTCCCGCCTCGG---AGGGCATCCTTCAGTTCGACATGTGGGACG 6609 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGA-AG-CTCTACGCGCTGATGTTATCAAACACGG 95081 ||||||| || | || | || ||||| || ||| | | || || | | | || || Sbjct 6608 TGAAGCCTTCTGACCTCTGGGAGTGGGATAGCCTCAAGGAGCAGA--TCAAGGAGCATGG 6551 Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141 | ||| | |||| | ||||||||||| ||||| || || | ||||| || || Sbjct 6550 GATTCGCAACTCATTGCTGCTCGCCCCCATGCCTACGGCTTCTACCTCTCAGATTCTGGG 6491 Query 95142 CAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGG 95201 ||||| |||| ||||| || | ||| |||||| | ||| | | || || || || || Sbjct 6490 TAACAATGAGTGCTTCGAGCCTTACACGTCCAACATTTACCAGCGCCGTGTCCTGGCAGG 6431 Query 95202 GGAATTCCCCGTCATCAA---CAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGT 95257 ||||||| || |||| | || ||| | || || | || | |||| | | Sbjct 6430 TGAATTCCAGGTTGTCAATCCCTGGCTACTCAAA---GATCTCGTCGAC-ATGGGCCTTT 6375 Query 95258 GGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317 || ||| | | ||||| | | | || ||||| || | ||||||||||| Sbjct 6374 GGTCTGATGCGATGAAGAATCGTATCATTGCCGAGAACGGTTCTATTCAGAACATCCCCA 6315 Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 | || |||| || ||||| || |||||||| || || ||||| || Sbjct 6314 ATATCCCGGCCGATATCAAAGCTCTCTACAAAACTGTTTGGGAAAT 6269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718945380480