Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq203 260 2e-64 >seq203 Length=54532 Score = 260 bits (288), Expect = 2e-64 Identities = 1122/1746 (64%), Gaps = 57/1746 (3%) Strand=Plus/Plus Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622 ||||||||| ||||||||||| || |||||||| || | ||||| || | | ||| Sbjct 6112 GTAGTACATGCCCGTCTTGAGACCTAGCTTCCAGCCAGTAAAGTGCATGGAAGTGATCTT 6171 Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 115682 | | || ||| | |||| | ||| | |||||| || || ||||| || Sbjct 6172 GCCCATGGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACC 6231 Query 115683 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAG 115740 || || || ||||| | | || | || | || ||||||| |||||| ||||| Sbjct 6232 ACGGTCAGCAGCCATCTGCACGACGTG--TCGTTGAGAAATTTCCCAAACAGTTTTGTAG 6289 Query 115741 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACC 115800 || || ||||| | ||||||| ||| || || ||||| ||| || | | Sbjct 6290 AGAGCTTTGATATCGGCCGGGATATTGGGGATGTTCTGAATAGA---ACCGTTCTCGGCA 6346 Query 115801 ATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGG 115857 |||| ||| |||||| | | ||||| || || || | |||||| | | || Sbjct 6347 ATGATACGATTCTTCATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGC 6406 Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917 ||||||||| || ||||| || ||| || | | | || ||||||| |||| Sbjct 6407 CAGGGATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTG 6466 Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977 || ||||| ||||||||||||||||||| || || | || || || || |||||||| Sbjct 6467 TAAGGCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGG 6526 Query 115978 GCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAG 116037 || | || | |||||| | || | || | || | ||||||||| ||||| Sbjct 6527 GCGAGCAGCAATGAGTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCAC 6586 Query 116038 TCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 || || | | || | | |||||||| || ||||| ||||| || | || || Sbjct 6587 TCCCAGAGGTCAGAAGGCTTCACGTCCCACATGTCGAACTGAAGGATGCCCTCCGAGGCG 6646 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG-GAGCTCGCCTC 116156 || || |||| || || | || || |||| ||| ||||||||| ||| || Sbjct 6647 GGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAG-AGGCAGT 6705 Query 116157 GAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGA 116216 |||||| || ||||| || |||||||| || | || | | ||| || || Sbjct 6706 GAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGA 6765 Query 116217 ATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 116276 || || | | || | || || | || |||||||| ||||| || | ||||| Sbjct 6766 CTCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAAT 6825 Query 116277 TGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGAT 116336 || || |||| ||| || ||||| || || ||||| || || ||| || Sbjct 6826 AGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAAT 6885 Query 116337 AACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA 116396 | || || || || || |||| |||| || |||||||| | | | || | Sbjct 6886 GATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTA 6945 Query 116397 ACTGCGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACAC 116453 ||| ||| | | | ||| | || || || | || |||| || || || Sbjct 6946 ---GCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATAC 7002 Query 116454 AGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAAT 116513 || | |||||| ||| |||||| ||||||||||| || | || || || || Sbjct 7003 AGCGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGAT 7062 Query 116514 GGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGG 116573 || ||||||||||| ||||| |||| ||||||| ||||||||||||||||| | || Sbjct 7063 TGTTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGG 7122 Query 116574 CGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCAC-A 116631 | |||||||| || |||| | || || | | ||| | | || | ||||| | Sbjct 7123 ATTACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGAGCTTCTG-----GGCACGA 7177 Query 116632 GTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGCCTCAAACTCT 116685 ||| | || || |||| |||| ||| ||||| ||||| ||||||||||| Sbjct 7178 ATGG---TCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCC 7234 Query 116686 TCACCCACAGC-CTCTGAGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCATTGAC 116743 || || ||| || | || || || || || | || || | |||| ||| | || Sbjct 7235 TC-GCCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATCAC 7292 Query 116744 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 116803 | || || || ||||||||||| || || || ||||| || || ||| | ||| | Sbjct 7293 CGTTCTTTTCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCAC 7352 Query 116804 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 116863 || || ||||||| | || || || ||||| || | || || | | ||| | Sbjct 7353 GAGCTCGGACTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGG 7412 Query 116864 CGTGCCACGGTTCCAGGTACACCGCGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTT 116919 ||||||| || |||| ||| | || | || ||| | || | | ||| |||||| Sbjct 7413 CGTGCCAAGGCTCCAAGTAAATGGCAAATGCACCAGGTCGCTTGTTG-CCACCCTGGTCA 7471 Query 116920 ACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCA 116979 ||||| || || || ||| || || |||||||| ||||||| ||||| || ||| Sbjct 7472 ACATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCG 7531 Query 116980 TTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCC 117039 || || || ||| ||| |||| | | | ||||| | || || ||||| Sbjct 7532 TTGGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACCA 7591 Query 117040 CCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAG 117099 || ||| ||| ||||| ||||| | |||| || | ||||| || ||||| | Sbjct 7592 CCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTG 7651 Query 117100 TCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTT--GGTGTACCAGCGT 117157 || |||| | | | ||||||||| ||||| || | || ||||| ||||||| Sbjct 7652 TCCTCCTTCATGTCAACGAGGAAGCAAGACGACA--GCTGACATTGAGGTGTGCCAGCGT 7709 Query 117158 TGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTC 117215 ||||||| || || | || || || | | | ||| |||||| || |||||| || Sbjct 7710 TGAAGAGTGTGGGCGAGGCATG--TGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTC 7767 Query 117216 CAAGACAGAGGGAA---TGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTA 117272 || ||| || ||||| ||| | ||||||| | || ||||||| ||||| Sbjct 7768 CAGGACTCGCTCAATATTGTCTCCCCAG---ATACCGACAGCAACACGCATAATCATGTG 7824 Query 117273 TTGGGG 117278 |||||| Sbjct 7825 TTGGGG 7830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613501923838080