Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq60 149 6e-31 seq245 143 3e-29 seq303 116 4e-21 >seq60 Length=156840 Score = 149 bits (164), Expect = 6e-31 Identities = 199/276 (72%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||||||| | | || || |||||||||| | ||||||||| ||| || || Sbjct 140324 GTAGGTGTCGATTAAGAGAGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAA 140383 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||||||||||| || ||||| || || ||||| ||| ||||| |||| || Sbjct 140384 TCCGTAAAAGCAACGAGCCTCAGGGACTTGGACTTCACCGCTGAAGCGCTCAACCAAGTT 140443 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||||||||||||| || || ||||| ||||| | ||| |||||| | Sbjct 140444 CTCGTTGACGATGCCGTCGGAAGCAGCAAAAAATGCCAGTATGTGGGAGATGAAGTATTT 140503 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||||| || |||| || | ||||||| || || || ||||| || | ||| || Sbjct 140504 CTCGTCATCATTCAGACGATTGTTCCAGTCGTGCAAATCTTTTGACAGATCGATCTCTTC 140563 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||| || || |||||||| ||||||||||| Sbjct 140564 GGCCGTCCAGAAGGAAGCCTCGGCCTTTTTGTACAT 140599 Score = 136 bits (150), Expect = 4e-27 Identities = 343/515 (67%), Gaps = 10/515 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || ||||| || || || |||||||| ||||| || || || | Sbjct 139689 CATGACACCAGCCTTCTGATACTCACCAACTCGCTTCTCAAAGAAATTTGTCTTGCCGCC 139748 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTG--GTGCCG 132708 ||| || ||| | ||| || || || || ||||| || || || ||| || | Sbjct 139749 CAATGAGATGTTCTCCATGAAGTCAAAAGGATTGGCCGTCTTATACACCTTCTCGTTACC 139808 Query 132709 ATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAA 132768 | || | |||||||| | |||||||| ||||| ||||| ||| ||| | | | Sbjct 139809 AAGAG--CAACGAGCAGGCGATCGGCCACAAACTCAATGTACTGCTTCATCAATGTGGCA 139866 Query 132769 TTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGAC 132827 || | ||||| ||| |||| |||| || || || ||||| ||||||||||| ||| Sbjct 139867 TTCATGCCCAGTAGA-GCACATGGCAAAGCCTCAGTCAGAAACTCTTGCTCGATGGTGAC 139925 Query 132828 CGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA 132887 || || || | || | | | | ||| | || ||| ||| || | Sbjct 139926 AGCATCTGTAATAATCTGTTGGATCATCTGCTTGCTGGCTCGGTGCTTCAAGTGAGAGTG 139985 Query 132888 CATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA 132947 || |||||| |||||||| ||||||||||| || | || || | ||||||| ||| Sbjct 139986 CAGCAAGCAGGCAAAGTCTGTGTGCAAGCCCTCATCACGCGAGATTAATTCGTTGGAGAA 140045 Query 132948 AGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGA 133007 || | |||||||| | ||| || || || ||||| || || | || ||| || Sbjct 140046 GGTGAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAAGCAAAAGCACCGCT 140105 Query 133008 AAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTT 133067 ||||| | || || || || || ||||| |||| ||||| | |||| ||| |||||| Sbjct 140106 GAAGAAAATACCTTCCACAGCAGCAAAAGCAACCAAGCGCTGGGCGAAGCTGGATTCTTT 140165 Query 133068 G--CTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | ||| |||||||| | |||||||| ||||| Sbjct 140166 GTCCTG--AATCCAGCGGATAGCCCATTCTGCCTT 140198 >seq245 Length=42083 Score = 143 bits (158), Expect = 3e-29 Identities = 167/220 (76%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || |||||||| || || |||||| |||| || ||| | Sbjct 31650 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTCGAGGTGGAGTCT 31709 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| |||||| | || Sbjct 31710 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 31768 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | || ||||| ||||| || || | |||||||| |||||| Sbjct 31769 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCCGACTA 31828 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||| || ||||| ||||||||||| Sbjct 31829 CAACATCCAGAAGGAGAGC-ACTCTGCACTTGGTGCTGCG 31867 >seq303 Length=27345 Score = 116 bits (128), Expect = 4e-21 Identities = 158/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || ||||| |||||||| | || |||||| | | Sbjct 10976 ATGCAAATTTTCGTCAAAACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCT 11035 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || || | ||||| ||||| || ||| |||| | Sbjct 11036 GACACCATCGACAATG--TCAAGACCAAGATTCAGGACAAGGAGGGGATCCCCCCCGATC 11093 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || || | || || || ||||| || |||| ||||||||| ||||||| Sbjct 11094 AACAGCGTCTGATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCAGACTACA 11153 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| || ||||| | || || ||| | ||||| || Sbjct 11154 ACATTCAGAAGGAGTCTACTCTTCATCTTGTGCTCCG 11190 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || ||||||||| |||| || ||| | | Sbjct 11493 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTGGAGTCGTCT 11552 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | ||| || || | || || || || ||||| |||| || Sbjct 11553 GACACTATAGACAATGTGAAAACGAAGATTCAAGATAAGGAAGGCATTCCTCCCGATCAG 11612 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||||| || || | || || || ||||||||| Sbjct 11613 CAGCGTCTTATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACACTTGCAGACTACAAC 11672 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || ||||||||||| |||||||| | || || Sbjct 11673 ATCCAGAAGGAGTCAACTTTGCATTTGGTGTTGCGTTTGCGTGGTGG 11719 Score = 82.4 bits (90), Expect = 8e-11 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || | || || || ||||||||| |||| || ||| | | || | | Sbjct 11272 TAGTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCA 11331 Query 38311 TGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369 | | |||| | ||| || || | || || || || || || ||||||| ||||| Sbjct 11332 TCGACAACG-TGAAAACCAAGATTCAAGATAAGGAAGGCATCCCTCCCGACCAGCAGCGT 11390 Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429 || |||| ||| || || |||||||| || | || || ||| ||| ||||||||||| Sbjct 11391 CTGATTTTCGCTGGTAAGCAGCTGGAAGATGGCCGTACGCTCGCCGATTACAACATCCAG 11450 Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| | || || ||| | || || || Sbjct 11451 AAGGAGTCCACACTTCATCTTGTTCTCCG 11479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168498513920