Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq60 149 6e-31
seq245 143 3e-29
seq303 116 4e-21
>seq60
Length=156840
Score = 149 bits (164), Expect = 6e-31
Identities = 199/276 (72%), Gaps = 3/276 (1%)
Strand=Plus/Plus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||||||||| | | || || |||||||||| | ||||||||| ||| || ||
Sbjct 140324 GTAGGTGTCGATTAAGAGAGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAA 140383
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
||||||||||| || ||||| || || ||||| ||| ||||| |||| ||
Sbjct 140384 TCCGTAAAAGCAACGAGCCTCAGGGACTTGGACTTCACCGCTGAAGCGCTCAACCAAGTT 140443
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||||||||||||| || || ||||| ||||| | ||| |||||| |
Sbjct 140444 CTCGTTGACGATGCCGTCGGAAGCAGCAAAAAATGCCAGTATGTGGGAGATGAAGTATTT 140503
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||||| || |||| || | ||||||| || || || ||||| || | ||| ||
Sbjct 140504 CTCGTCATCATTCAGACGATTGTTCCAGTCGTGCAAATCTTTTGACAGATCGATCTCTTC 140563
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| | ||||| || || |||||||| |||||||||||
Sbjct 140564 GGCCGTCCAGAAGGAAGCCTCGGCCTTTTTGTACAT 140599
Score = 136 bits (150), Expect = 4e-27
Identities = 343/515 (67%), Gaps = 10/515 (2%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| || ||||| || || || |||||||| ||||| || || || |
Sbjct 139689 CATGACACCAGCCTTCTGATACTCACCAACTCGCTTCTCAAAGAAATTTGTCTTGCCGCC 139748
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTG--GTGCCG 132708
||| || ||| | ||| || || || || ||||| || || || ||| || |
Sbjct 139749 CAATGAGATGTTCTCCATGAAGTCAAAAGGATTGGCCGTCTTATACACCTTCTCGTTACC 139808
Query 132709 ATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAA 132768
| || | |||||||| | |||||||| ||||| ||||| ||| ||| | | |
Sbjct 139809 AAGAG--CAACGAGCAGGCGATCGGCCACAAACTCAATGTACTGCTTCATCAATGTGGCA 139866
Query 132769 TTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGAC 132827
|| | ||||| ||| |||| |||| || || || ||||| ||||||||||| |||
Sbjct 139867 TTCATGCCCAGTAGA-GCACATGGCAAAGCCTCAGTCAGAAACTCTTGCTCGATGGTGAC 139925
Query 132828 CGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA 132887
|| || || | || | | | | ||| | || ||| ||| || |
Sbjct 139926 AGCATCTGTAATAATCTGTTGGATCATCTGCTTGCTGGCTCGGTGCTTCAAGTGAGAGTG 139985
Query 132888 CATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA 132947
|| |||||| |||||||| ||||||||||| || | || || | ||||||| |||
Sbjct 139986 CAGCAAGCAGGCAAAGTCTGTGTGCAAGCCCTCATCACGCGAGATTAATTCGTTGGAGAA 140045
Query 132948 AGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGA 133007
|| | |||||||| | ||| || || || ||||| || || | || ||| ||
Sbjct 140046 GGTGAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAAGCAAAAGCACCGCT 140105
Query 133008 AAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTT 133067
||||| | || || || || || ||||| |||| ||||| | |||| ||| ||||||
Sbjct 140106 GAAGAAAATACCTTCCACAGCAGCAAAAGCAACCAAGCGCTGGGCGAAGCTGGATTCTTT 140165
Query 133068 G--CTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
| ||| |||||||| | |||||||| |||||
Sbjct 140166 GTCCTG--AATCCAGCGGATAGCCCATTCTGCCTT 140198
>seq245
Length=42083
Score = 143 bits (158), Expect = 3e-29
Identities = 167/220 (76%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || |||||||| || || |||||| |||| || ||| |
Sbjct 31650 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTCGAGGTGGAGTCT 31709
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || || |||| ||||| ||||| |||||| | ||
Sbjct 31710 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 31768
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| ||||| | || ||||| ||||| || || | |||||||| ||||||
Sbjct 31769 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCCGACTA 31828
Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
||||||||| ||||| ||| || ||||| |||||||||||
Sbjct 31829 CAACATCCAGAAGGAGAGC-ACTCTGCACTTGGTGCTGCG 31867
>seq303
Length=27345
Score = 116 bits (128), Expect = 4e-21
Identities = 158/217 (73%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| || || ||||| |||||||| | || |||||| | |
Sbjct 10976 ATGCAAATTTTCGTCAAAACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCT 11035
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | || | | |||| || || | ||||| ||||| || ||| |||| |
Sbjct 11036 GACACCATCGACAATG--TCAAGACCAAGATTCAGGACAAGGAGGGGATCCCCCCCGATC 11093
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| || || | || || || ||||| || |||| ||||||||| |||||||
Sbjct 11094 AACAGCGTCTGATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCAGACTACA 11153
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||| || ||||| | || || ||| | ||||| ||
Sbjct 11154 ACATTCAGAAGGAGTCTACTCTTCATCTTGTGCTCCG 11190
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || ||||||||| |||| || ||| | |
Sbjct 11493 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTGGAGTCGTCT 11552
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | ||| || || | || || || || ||||| |||| ||
Sbjct 11553 GACACTATAGACAATGTGAAAACGAAGATTCAAGATAAGGAAGGCATTCCTCCCGATCAG 11612
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| || || ||||| || || | || || || |||||||||
Sbjct 11613 CAGCGTCTTATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACACTTGCAGACTACAAC 11672
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| | || ||||||||||| |||||||| | || ||
Sbjct 11673 ATCCAGAAGGAGTCAACTTTGCATTTGGTGTTGCGTTTGCGTGGTGG 11719
Score = 82.4 bits (90), Expect = 8e-11
Identities = 145/209 (69%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310
|| |||| || || | || || || ||||||||| |||| || ||| | | || | |
Sbjct 11272 TAGTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCA 11331
Query 38311 TGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369
| | |||| | ||| || || | || || || || || || ||||||| |||||
Sbjct 11332 TCGACAACG-TGAAAACCAAGATTCAAGATAAGGAAGGCATCCCTCCCGACCAGCAGCGT 11390
Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429
|| |||| ||| || || |||||||| || | || || ||| ||| |||||||||||
Sbjct 11391 CTGATTTTCGCTGGTAAGCAGCTGGAAGATGGCCGTACGCTCGCCGATTACAACATCCAG 11450
Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| | || || ||| | || || ||
Sbjct 11451 AAGGAGTCCACACTTCATCTTGTTCTCCG 11479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500168498513920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |