Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq303 96.9 1e-14 >seq303 Length=27345 Score = 96.9 bits (106), Expect = 1e-14 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119 |||| || || |||| || || || || || || || || || || ||||||| ||| | Sbjct 11275 TCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCATCG 11334 Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179 | | ||| || ||||||||||||||||| || ||||| || || || ||| | | Sbjct 11335 ACAACGTGAAAACCAAGATTCAAGATAAGGAAGGCATCCCTCCCGACCAGCAGCGTCTGA 11394 Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239 ||||| | || || || || |||||||| | || | || ||||| || || | |||| Sbjct 11395 TTTTCGCTGGTAAGCAGCTGGAAGATGGCCGTACGCTCGCCGATTACAACATCCAGAAGG 11454 Query 391240 ATGCAACACTTCA 391252 | | |||||||| Sbjct 11455 AGTCCACACTTCA 11467 Score = 86.0 bits (94), Expect = 2e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || || || || || || || ||| Sbjct 11493 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTGGAGTCGTCT 11552 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | ||| || ||||||||||||||||| |||||||| ||||| Sbjct 11553 GACACTATAGACAATGTGAAAACGAAGATTCAAGATAAGGAAGGCATTCCTCCCGATCAG 11612 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || ||||| | || | || || || || Sbjct 11613 CAGCGTCTTATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACACTTGCAGACTACAAC 11672 Query 391230 ATTGATAAGGATGCAAC 391246 || | ||||| |||| Sbjct 11673 ATCCAGAAGGAGTCAAC 11689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975700984042304