Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq88 170 2e-37 >seq88 Length=118767 Score = 170 bits (188), Expect = 2e-37 Identities = 214/291 (74%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| ||||| || |||||||| || || || || || || || |||||||| ||||| || Sbjct 108838 ATCAAAATCCTCGCCACCCAAATGGGTGTCACCAGCTGTGGCCTTGACTTCGAAGATGCC 108779 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 ||||||| | || | || |||||||| ||||| || || |||||||| || | || Sbjct 108778 GTCTTCAATAGTCAAAAGAGATACATCAAAAGTACCTCCGCCAAGGTCAAAGATCAACAC 108719 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || ||| | || ||||| || || |||||||| ||||| || || ||||| || Sbjct 108718 ATTGCGCTCGCCTTCAGCCTTCTTGTCAAGGCCGTACGCAATAGCTGCGGCAGTTGGCTC 108659 Query 7636 ATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||| || ||||| |||| ||| | || |||||||| | || || || |||||||| | Sbjct 108658 ATTGATGATACGCAAGAT-GTTGATTCCGGCAATAGTACCAGCGTCCTTGGTCGCTTGAC 108600 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTT 7745 | ||||| ||||||||||| || || || || || || || ||| ||| || Sbjct 108599 GCTGCGAGTCGTTAAAGTATGCTGGAACAGTGACCACAGCATCCTTGATTT 108549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635127337857920