Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq203 241 2e-58 seq48 111 2e-19 seq60 91.5 2e-13 >seq203 Length=54532 Score = 241 bits (266), Expect = 2e-58 Identities = 900/1387 (65%), Gaps = 33/1387 (2%) Strand=Plus/Minus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| | ||||| || || |||||||| || || ||||||| || |||| | Sbjct 7823 ACATGATTATGCGTGTTGCTGTCGGTATCTGGGGAGACAATATTGAGCGAGTCCTGGAAA 7764 Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTG 111738 | ||| | |||||| | | || | || || | || || ||||||||||||| Sbjct 7763 CCTACCATCTCATGTCCAGCAAACTCTTTACACATGCCTCGCCCACACTCTTCAACGCTG 7704 Query 111739 GTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCA 111798 | ||||| | || |||| ||| ||||| ||| | |||||||| ||| Sbjct 7703 GCACACCTCAATGTCAGCTGTCGTCTTGCTTCCTCGTTGACATGAAGGAGGACAGCATCG 7644 Query 111799 ATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCG 111858 | ||||| || | ||| |||| || ||| ||||| ||| |||||||||||||| Sbjct 7643 AAGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAGATGGCTGGTGGTATCG 7584 Query 111859 GGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAAT 111918 | || | |||| | | | |||| ||| ||| ||| || || || | Sbjct 7583 GCTTGAATGTCCACCGTATTCGCGCCACTGGCTCTTACATTGCAGGCACCAACGGCACGT 7524 Query 111919 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAG 111978 | ||||| | ||||| |||||||| || || ||| ||| || | ||||| |||| | Sbjct 7523 CCAATGGTGTCATTCCCATGCTTCGTGTTTTCAACAACACTGCCAGATATGTTGACCAGG 7464 Query 111979 CTGGGCGTCGCAAGGGATCTATCGCAGT--CTAT---CTTG-AGCCATGGCACGCGGATA 112032 ||| |||| || || ||| | | || |||| |||| |||||||| ||| Sbjct 7463 GTGGCAA---CAAGCGACCTGGTGCATTTGCCATTTACTTGGAGCCTTGGCACGCCGATG 7407 Query 112033 TCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATC 112092 | | ||||||||||| ||||| ||||| ||| | || || | || || ||| Sbjct 7406 TGTTTGAGTTCCTTGATTTGCGAAAGAACCACGGTAAGGAAGAAGTCCGAGCTCGTGATT 7347 Query 112093 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATT 112152 | ||| ||||| |||||||| ||||| ||||||||| | || || ||| || ||| Sbjct 7346 TATTCCTTGCTCTTTGGATTCCCGATCTTTTCATGAAGCGTGTCGAAAAGAACGGTGATT 7287 Query 112153 GGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 112211 || |||| | || || || || || ||||| || | || | || ||||||||| Sbjct 7286 GGACTCTGATGTGCCCCAACGAATGC-CCCGGCCTGGCTGACTGCTACGGCGAGGAGTTT 7228 Query 112212 GAAGCCCTCTACACAAAGTACGAG---GA-AGAAAGTCGGGCGACTGCGACGGTGCCAGC 112267 || || ||||| ||||| ||| || | ||| || || |||||| | | || Sbjct 7227 GAGGCTCTCTATGAGAAGTATGAGCGTGAGGGCAAG--GGTCG--TGCGACCATTCGTGC 7172 Query 112268 TGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326 | || | | ||| | | || || | | || |||||||| |||| || | |||| Sbjct 7171 -CCAGAAGCTCTGGTACTCCATCCTGGAAGCCCAGACCGAGACGGGTAATCCTTTCATGC 7113 Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386 | ||||| || ||||||||| |||||| ||||| ||||| ||||| ||| || | Sbjct 7112 TCTACAAGGATGCCTGTAACAGAAAGAGCAATCAGAAGAACTTGGGAACAATCCGCAGCT 7053 Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446 |||||||||| || ||||| | || | | | | |||||| ||||| || ||| Sbjct 7052 CCAACCTCTGCACGGAAATTATCGAGTACTCTGCCCCTGATGAGGTCGCTGTATGCAACT 6993 Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC-ATTTGATTATGAA 112505 | || || | ||||| ||| | ||| || | | | | ||| | || | | Sbjct 6992 TGGCCTCTCTGGCTCTGCCCGCCTTTGTTGA-CTACAACGAGGGACGCTACGACTTCCAG 6934 Query 112506 AAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAAT 112565 || || ||||| || ||| | || ||||| |||||| | |||||| || Sbjct 6933 AAGCTTCACGAGGTCACGCAGGTCGTTGTTCGTAACCTGAACAGAATCATTGATGTCAAC 6874 Query 112566 TTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625 |||||||| || || || || || ||| ||||||| || |||||| | || Sbjct 6873 CACTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGACACCGACCTATTGGTGTTGGC 6814 Query 112626 GTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGC 112684 ||||| |||||||| || | ||| || | ||| ||| |||| || || ||||| Sbjct 6813 GTCCAGGGTCTCGCTGACGCTTTCCTTGCCTTG-CGCATGCCATTCGAGTCACCTGAAGC 6755 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744 || |||| || ||||||||||| || ||||| || || || || | Sbjct 6754 CCGTGAGCTCAACAAGCAGATATTTGAGACCATTTATCATGCTGCCCTCACTGCCTCTCT 6695 Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804 || ||||| ||| | || || || | || || |||| ||||| || || | || Sbjct 6694 CGAATTGGCCAAGGAACAGGGGCCCTACGCCACTTTCAAGGGCTCTCCCGCCTCGGAGGG 6635 Query 112805 GGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACGCT 112862 | ||||| || || ||||||| | |||| | | || | || || ||||| Sbjct 6634 CATCCTTCAGTTCGACATGTGGG-ACGTGA-AGCCTTCTGACCTCTGGGAGTGGGATAGC 6577 Query 112863 CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGC 112920 |||||||| | ||||||||| | || |||| ||| || || || | || || |||| Sbjct 6576 CTCAAGGAGCAGATCAAGGAGCATGGGATTCGCAAC--TCATTGCTGCTCGCCCCCATGC 6519 Query 112921 CAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGA 112980 | || || || ||| | || || ||||||| ||||| ||||| || || |||||| | | Sbjct 6518 CTACGGCTTCTACCTCTCAGATTCTGGGTAACAATGAGTGCTTCGAGCCTTACACGTCCA 6459 Query 112981 ACATCTA 112987 |||| || Sbjct 6458 ACATTTA 6452 >seq48 Length=174106 Score = 111 bits (122), Expect = 2e-19 Identities = 185/262 (71%), Gaps = 8/262 (3%) Strand=Plus/Minus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 |||||| || || |||||||||| |||||| ||| ||| | |||| | | | || || Sbjct 93563 GGCATCTATTTCGTCAATGAAGATGATGCAGGGTGCATTCTTGCGACCCTCGGCGAAAAG 93504 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182 ||| || || || | || |||||||||||||| || || || | | || || Sbjct 93503 ATCTCGGACCCGTGAAGGACCAACACCAACAAACATTTCTACGAATTCGGAACCGCTTAC 93444 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 || | ||| || ||| ||||||||| || ||||| ||| ||||| || || || | Sbjct 93443 GCTGAA-GAACGGAACACCAGATTCACCTGCCGTGGCTTTGGCAAGAAGCGTTTTGCCAG 93385 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 16299 ||||||| |||||||||| || || || ||||||||||| || |||| |||| | Sbjct 93384 TACCTGGAGGTCCCGCGAGGATAGCGCCGCGAGGAATCTTGGCCCCTAGCTTCTCAAACT 93325 Query 16300 ATCTCTCAGGTTGCTTAAGAAA 16321 ||||||| || || ||||| Sbjct 93324 ---TCTCAGGCTGTTTGAGAAA 93306 >seq60 Length=156840 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/229 (70%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAG- 102164 || |||||| || |||| ||||| || || |||||||| ||| || | |||||| Sbjct 140220 AATAGTTCCTTGCATTCGCAAGAAGGCAGAATGGGCTATCCGCTGGATTCAGGACAAAGA 140161 Query 102165 -TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 || | ||| || |||| | | || ||||| ||| || ||||| |||||| Sbjct 140160 ATCCAG---CTTCGCCCAGCGCTTGGTTGCTTTTGCTGCTGTGGAAGGTATTTTCTTCAG 140104 Query 102224 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 102282 ||| | || ||| |||| | ||||| |||||||| || | ||||| |||||| || Sbjct 140103 CGGTGCTTT-TGCTTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTCACCT 140045 Query 102283 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||||| | ||||| ||||| ||||| | ||| ||| ||||| Sbjct 140044 TCTCCAACGAATTAATCTCGCGTGATGAGGGCTTGCACACAGACTTTGC 139996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620737061615360