Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq203 241 2e-58
seq48 111 2e-19
seq60 91.5 2e-13
>seq203
Length=54532
Score = 241 bits (266), Expect = 2e-58
Identities = 900/1387 (65%), Gaps = 33/1387 (2%)
Strand=Plus/Minus
Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678
||||| | ||||| || || |||||||| || || ||||||| || |||| |
Sbjct 7823 ACATGATTATGCGTGTTGCTGTCGGTATCTGGGGAGACAATATTGAGCGAGTCCTGGAAA 7764
Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTG 111738
| ||| | |||||| | | || | || || | || || |||||||||||||
Sbjct 7763 CCTACCATCTCATGTCCAGCAAACTCTTTACACATGCCTCGCCCACACTCTTCAACGCTG 7704
Query 111739 GTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCA 111798
| ||||| | || |||| ||| ||||| ||| | |||||||| |||
Sbjct 7703 GCACACCTCAATGTCAGCTGTCGTCTTGCTTCCTCGTTGACATGAAGGAGGACAGCATCG 7644
Query 111799 ATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCG 111858
| ||||| || | ||| |||| || ||| ||||| ||| ||||||||||||||
Sbjct 7643 AAGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAGATGGCTGGTGGTATCG 7584
Query 111859 GGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAAT 111918
| || | |||| | | | |||| ||| ||| ||| || || || |
Sbjct 7583 GCTTGAATGTCCACCGTATTCGCGCCACTGGCTCTTACATTGCAGGCACCAACGGCACGT 7524
Query 111919 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAG 111978
| ||||| | ||||| |||||||| || || ||| ||| || | ||||| |||| |
Sbjct 7523 CCAATGGTGTCATTCCCATGCTTCGTGTTTTCAACAACACTGCCAGATATGTTGACCAGG 7464
Query 111979 CTGGGCGTCGCAAGGGATCTATCGCAGT--CTAT---CTTG-AGCCATGGCACGCGGATA 112032
||| |||| || || ||| | | || |||| |||| |||||||| |||
Sbjct 7463 GTGGCAA---CAAGCGACCTGGTGCATTTGCCATTTACTTGGAGCCTTGGCACGCCGATG 7407
Query 112033 TCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATC 112092
| | ||||||||||| ||||| ||||| ||| | || || | || || |||
Sbjct 7406 TGTTTGAGTTCCTTGATTTGCGAAAGAACCACGGTAAGGAAGAAGTCCGAGCTCGTGATT 7347
Query 112093 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATT 112152
| ||| ||||| |||||||| ||||| ||||||||| | || || ||| || |||
Sbjct 7346 TATTCCTTGCTCTTTGGATTCCCGATCTTTTCATGAAGCGTGTCGAAAAGAACGGTGATT 7287
Query 112153 GGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 112211
|| |||| | || || || || || ||||| || | || | || |||||||||
Sbjct 7286 GGACTCTGATGTGCCCCAACGAATGC-CCCGGCCTGGCTGACTGCTACGGCGAGGAGTTT 7228
Query 112212 GAAGCCCTCTACACAAAGTACGAG---GA-AGAAAGTCGGGCGACTGCGACGGTGCCAGC 112267
|| || ||||| ||||| ||| || | ||| || || |||||| | | ||
Sbjct 7227 GAGGCTCTCTATGAGAAGTATGAGCGTGAGGGCAAG--GGTCG--TGCGACCATTCGTGC 7172
Query 112268 TGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326
| || | | ||| | | || || | | || |||||||| |||| || | ||||
Sbjct 7171 -CCAGAAGCTCTGGTACTCCATCCTGGAAGCCCAGACCGAGACGGGTAATCCTTTCATGC 7113
Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386
| ||||| || ||||||||| |||||| ||||| ||||| ||||| ||| || |
Sbjct 7112 TCTACAAGGATGCCTGTAACAGAAAGAGCAATCAGAAGAACTTGGGAACAATCCGCAGCT 7053
Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446
|||||||||| || ||||| | || | | | | |||||| ||||| || |||
Sbjct 7052 CCAACCTCTGCACGGAAATTATCGAGTACTCTGCCCCTGATGAGGTCGCTGTATGCAACT 6993
Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC-ATTTGATTATGAA 112505
| || || | ||||| ||| | ||| || | | | | ||| | || | |
Sbjct 6992 TGGCCTCTCTGGCTCTGCCCGCCTTTGTTGA-CTACAACGAGGGACGCTACGACTTCCAG 6934
Query 112506 AAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAAT 112565
|| || ||||| || ||| | || ||||| |||||| | |||||| ||
Sbjct 6933 AAGCTTCACGAGGTCACGCAGGTCGTTGTTCGTAACCTGAACAGAATCATTGATGTCAAC 6874
Query 112566 TTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625
|||||||| || || || || || ||| ||||||| || |||||| | ||
Sbjct 6873 CACTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGACACCGACCTATTGGTGTTGGC 6814
Query 112626 GTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGC 112684
||||| |||||||| || | ||| || | ||| ||| |||| || || |||||
Sbjct 6813 GTCCAGGGTCTCGCTGACGCTTTCCTTGCCTTG-CGCATGCCATTCGAGTCACCTGAAGC 6755
Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744
|| |||| || ||||||||||| || ||||| || || || || |
Sbjct 6754 CCGTGAGCTCAACAAGCAGATATTTGAGACCATTTATCATGCTGCCCTCACTGCCTCTCT 6695
Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804
|| ||||| ||| | || || || | || || |||| ||||| || || | ||
Sbjct 6694 CGAATTGGCCAAGGAACAGGGGCCCTACGCCACTTTCAAGGGCTCTCCCGCCTCGGAGGG 6635
Query 112805 GGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACGCT 112862
| ||||| || || ||||||| | |||| | | || | || || |||||
Sbjct 6634 CATCCTTCAGTTCGACATGTGGG-ACGTGA-AGCCTTCTGACCTCTGGGAGTGGGATAGC 6577
Query 112863 CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGC 112920
|||||||| | ||||||||| | || |||| ||| || || || | || || ||||
Sbjct 6576 CTCAAGGAGCAGATCAAGGAGCATGGGATTCGCAAC--TCATTGCTGCTCGCCCCCATGC 6519
Query 112921 CAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGA 112980
| || || || ||| | || || ||||||| ||||| ||||| || || |||||| | |
Sbjct 6518 CTACGGCTTCTACCTCTCAGATTCTGGGTAACAATGAGTGCTTCGAGCCTTACACGTCCA 6459
Query 112981 ACATCTA 112987
|||| ||
Sbjct 6458 ACATTTA 6452
>seq48
Length=174106
Score = 111 bits (122), Expect = 2e-19
Identities = 185/262 (71%), Gaps = 8/262 (3%)
Strand=Plus/Minus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
|||||| || || |||||||||| |||||| ||| ||| | |||| | | | || ||
Sbjct 93563 GGCATCTATTTCGTCAATGAAGATGATGCAGGGTGCATTCTTGCGACCCTCGGCGAAAAG 93504
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182
||| || || || | || |||||||||||||| || || || | | || ||
Sbjct 93503 ATCTCGGACCCGTGAAGGACCAACACCAACAAACATTTCTACGAATTCGGAACCGCTTAC 93444
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
|| | ||| || ||| ||||||||| || ||||| ||| ||||| || || || |
Sbjct 93443 GCTGAA-GAACGGAACACCAGATTCACCTGCCGTGGCTTTGGCAAGAAGCGTTTTGCCAG 93385
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 16299
||||||| |||||||||| || || || ||||||||||| || |||| |||| |
Sbjct 93384 TACCTGGAGGTCCCGCGAGGATAGCGCCGCGAGGAATCTTGGCCCCTAGCTTCTCAAACT 93325
Query 16300 ATCTCTCAGGTTGCTTAAGAAA 16321
||||||| || || |||||
Sbjct 93324 ---TCTCAGGCTGTTTGAGAAA 93306
>seq60
Length=156840
Score = 91.5 bits (100), Expect = 2e-13
Identities = 161/229 (70%), Gaps = 8/229 (3%)
Strand=Plus/Minus
Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAG- 102164
|| |||||| || |||| ||||| || || |||||||| ||| || | ||||||
Sbjct 140220 AATAGTTCCTTGCATTCGCAAGAAGGCAGAATGGGCTATCCGCTGGATTCAGGACAAAGA 140161
Query 102165 -TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223
|| | ||| || |||| | | || ||||| ||| || ||||| ||||||
Sbjct 140160 ATCCAG---CTTCGCCCAGCGCTTGGTTGCTTTTGCTGCTGTGGAAGGTATTTTCTTCAG 140104
Query 102224 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 102282
||| | || ||| |||| | ||||| |||||||| || | ||||| |||||| ||
Sbjct 140103 CGGTGCTTT-TGCTTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTCACCT 140045
Query 102283 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|||||||||| | ||||| ||||| ||||| | ||| ||| |||||
Sbjct 140044 TCTCCAACGAATTAATCTCGCGTGATGAGGGCTTGCACACAGACTTTGC 139996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620737061615360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |