Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq23 107 2e-18 >seq23 Length=269906 Score = 107 bits (118), Expect = 2e-18 Identities = 222/328 (68%), Gaps = 2/328 (1%) Strand=Plus/Plus Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735 ||| | |||||| | |||||||||||||| || | || ||||| ||| | Sbjct 267178 ACCAATAGCGTCCAACTCATCGATGAATATAATGGAGGGCGACTTGGCCTTTGCAGCCGC 267237 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| || ||||| ||||||||||| || || || || || |||||| |||| | | | Sbjct 267238 GAAGAGGTCACGGACACGCTTCGCGCCCACGCCGACAAAGATCTCATCGAA-CTCACTAC 267296 Query 11796 AGAACA-CTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 | ||| | | ||| || || || |||||||| | |||||| || || || |||| Sbjct 267297 CGGACATGTAGAAGAATGGGACCCCAGCTTCACCAGCCACGGCTCGGGCAAGTAGCGTCT 267356 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAA 11914 | || || ||||| | |||| | ||||| |||| ||| | ||| ||||| | Sbjct 267357 TTCCTGTTCCAGGAGGACCAACTAGAAGCACGCCCTTGGGCAGCTTAGCACCCAAGTCGG 267416 Query 11915 AGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGT 11974 || | ||||| ||||| ||||| ||||| | |||| ||| || || ||||| | Sbjct 267417 AGAAATTTTCAGGATTCTTCAGGAATTCCACCACTTCCTGAAGCTCTTCTTTGGCCTCAT 267476 Query 11975 CGATACCCTCAACATCGGTGAAACGAGT 12002 || ||| | || || |||||||||| Sbjct 267477 CGCAACCATGGACGTCACTGAAACGAGT 267504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970934806400