Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq23 107 2e-18
>seq23
Length=269906
Score = 107 bits (118), Expect = 2e-18
Identities = 222/328 (68%), Gaps = 2/328 (1%)
Strand=Plus/Plus
Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735
||| | |||||| | |||||||||||||| || | || ||||| ||| |
Sbjct 267178 ACCAATAGCGTCCAACTCATCGATGAATATAATGGAGGGCGACTTGGCCTTTGCAGCCGC 267237
Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795
||| || ||||| ||||||||||| || || || || || |||||| |||| | | |
Sbjct 267238 GAAGAGGTCACGGACACGCTTCGCGCCCACGCCGACAAAGATCTCATCGAA-CTCACTAC 267296
Query 11796 AGAACA-CTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854
| ||| | | ||| || || || |||||||| | |||||| || || || ||||
Sbjct 267297 CGGACATGTAGAAGAATGGGACCCCAGCTTCACCAGCCACGGCTCGGGCAAGTAGCGTCT 267356
Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAA 11914
| || || ||||| | |||| | ||||| |||| ||| | ||| ||||| |
Sbjct 267357 TTCCTGTTCCAGGAGGACCAACTAGAAGCACGCCCTTGGGCAGCTTAGCACCCAAGTCGG 267416
Query 11915 AGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGT 11974
|| | ||||| ||||| ||||| ||||| | |||| ||| || || ||||| |
Sbjct 267417 AGAAATTTTCAGGATTCTTCAGGAATTCCACCACTTCCTGAAGCTCTTCTTTGGCCTCAT 267476
Query 11975 CGATACCCTCAACATCGGTGAAACGAGT 12002
|| ||| | || || ||||||||||
Sbjct 267477 CGCAACCATGGACGTCACTGAAACGAGT 267504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588970934806400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |