Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq203 316 2e-81 seq48 102 1e-16 >seq203 Length=54532 Score = 316 bits (350), Expect = 2e-81 Identities = 1134/1742 (65%), Gaps = 51/1742 (3%) Strand=Plus/Plus Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGC-GTACATATGCATAGAAGAGAGCTT 105654 |||||||| || |||||||| ||| | ||||| | ||| | ||||| |||| || ||| Sbjct 6113 TAGTACATGCCCGTCTTGAGACCTAGCTTCCAGCCAGTAAAG-TGCATGGAAGTGATCTT 6171 Query 105655 GGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACC 105714 | ||| || ||| | |||| || || | ||| |||||||||||| ||| Sbjct 6172 GCCCATGGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACC 6231 Query 105715 ACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCCACACTGTGCGGTAG 105772 ||| | || ||||| | | ||| | || | || ||||||| || || |||| Sbjct 6232 ACGGTCAGCAGCCATCTGCACGACGTG--TCGTTGAGAAATTTCCCAAACAGTTTTGTAG 6289 Query 105773 AGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACC 105832 ||| |||||||| | ||||||| | ||| || ||||| ||||| | | | | Sbjct 6290 AGAGCTTTGATATCGGCCGGGATATTGGGGATGTTCTGAATAGAACCGTTCTC---GGCA 6346 Query 105833 ATGA---GATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGA 105889 |||| ||| |||||| | | |||||||| || || | |||||| |||| || Sbjct 6347 ATGATACGATTCTTCATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGC 6406 Query 105890 TGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTG 105949 ||||||| | || || || || ||| | | | | || ||||| | |||| Sbjct 6407 CAGGGATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTG 6466 Query 105950 TAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGT 106009 || || || ||||| ||||| ||||||| || || | ||| || || || ||||| || Sbjct 6467 TAAGGCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGG 6526 Query 106010 GCCATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCC 106067 || | || || || ||| |||| || | |||||||| | |||||||| ||||| Sbjct 6527 GCGAGCAGCAATGA--GTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCC 6584 Query 106068 AGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGA 106125 | || || | || || ||||| | ||||||| || || ||||| | || | || Sbjct 6585 ACTCCCAGAGGTCAGAA-GGCTTCACGT-CCCACATGTCGAACTGAAGGATGCCCTCCGA 6642 Query 106126 CGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCG 106184 | |||||| |||| || || | |||| || || | | |||||||| | || | Sbjct 6643 GGCGGGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAGAG-G 6701 Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244 | |||| || ||||| ||||| ||||| || | || | ||| ||||||| Sbjct 6702 CAGTGAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAG 6761 Query 106245 CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAAC 106304 ||| || |||| ||| | || || | || |||||||| || || || | || Sbjct 6762 GTGACTCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACAC 6821 Query 106305 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGT 106364 ||||||||| ||||||||| || ||||| || || ||||| || || | Sbjct 6822 CAATAGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACAT 6881 Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424 |||||| || ||| || || ||| | || |||| || ||||| || | | | Sbjct 6882 CAATGATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGT 6941 Query 106425 CAAAAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGC 106481 | | ||| ||| | | | ||| | || || || | || ||||| |||| Sbjct 6942 CGTA---GCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGC 6998 Query 106482 AAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCT 106541 | ||||| |||||| | | |||||| | |||||| || || | |||||| || Sbjct 6999 ATACAGCGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGC 7058 Query 106542 TAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGT 106601 || || ||||| ||||| || || |||||| |||| || |||||||||||||||||| Sbjct 7059 GGATTGTTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGA 7118 Query 106602 AGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGT 106660 | || | |||||||| ||||| | | || || | | ||| | | || | ||| | Sbjct 7119 AAGGATTACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGAGCTTCTG-GGCACG- 7176 Query 106661 ACAATGG-CGTTGGCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 106717 ||||| || | || | ||||| ||| ||||| ||||| || ||||||||| Sbjct 7177 --AATGGTCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCC 7234 Query 106718 TCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACC 106776 || || ||| | || || || || || || || || | |||| ||| | ||| Sbjct 7235 TCGCCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATCACC 7293 Query 106777 ACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT 106836 || || || |||||||||||||| || |||||||| || | || | ||| | Sbjct 7294 GTTCTTTTCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACG 7353 Query 106837 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 106896 | || | ||||| | ||| ||||| ||| || ||||||||||| | | ||| || Sbjct 7354 AGCTCGGACTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGC 7413 Query 106897 GTGCCATGGCT-CAAG---ATAG--ACTGCGATAGATCCCTTTCGACGCCCAGCTTGATT 106950 |||||| |||| |||| || | | ||| || || ||| | | ||| | || | Sbjct 7414 GTGCCAAGGCTCCAAGTAAATGGCAAATGCACCAGGTCGCTT--GTTG-CCACCCTGGTC 7470 Query 106951 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 107010 ||||| | || ||| ||| || || |||||||| ||||| | ||||| || || Sbjct 7471 AACATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCC 7530 Query 107011 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 107070 || || || ||| ||| | |||| | | | |||| | || || ||||| Sbjct 7531 GTTGGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACC 7590 Query 107071 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 107130 |||||| ||| ||||| || || | | || || ||||||| || | ||| Sbjct 7591 ACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCT 7650 Query 107131 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 107190 ||||||||| || | | ||||||||| |||| ||| | ||||| ||||| || Sbjct 7651 GTCCTCCTTCATGTCAACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTT 7710 Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCC 107248 |||||| || || | || || || | | | ||| |||||| | ||| || ||| Sbjct 7711 GAAGAGTGTGGGCGAGGCATG--TGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCC 7768 Query 107249 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGG 107308 | ||| ||||| | || || ||| |||| || |||||||||| ||||| |||| Sbjct 7769 AGGACTCGCTCAATATTGTCTCCCCAGATACCGACAGCAACACGCATAATCATGTGTTGG 7828 Query 107309 GG 107310 || Sbjct 7829 GG 7830 >seq48 Length=174106 Score = 102 bits (112), Expect = 1e-16 Identities = 183/262 (70%), Gaps = 8/262 (3%) Strand=Plus/Minus Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 9430 |||||| || || |||||||||| || || ||| ||| | ||| | | || || Sbjct 93563 GGCATCTATTTCGTCAATGAAGATGATGCAGGGTGCATTCTTGCGACCCTCGGCGAAAAG 93504 Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9489 ||| || |||| | | || |||||||||||||| || || || | | || || Sbjct 93503 ATCTCGGACCCGTGAAGGACCAACACCAACAAACATTTCTACGAATTCGGAACCGCTTAC 93444 Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549 || | ||| || ||| ||||||||| || ||||| ||| ||||| || || || | Sbjct 93443 GCTGAA-GAACGGAACACCAGATTCACCTGCCGTGGCTTTGGCAAGAAGCGTTTTGCCAG 93385 Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 9606 ||||||| |||||||||| || || || ||||||||||| || |||| |||| | Sbjct 93384 TACCTGGAGGTCCCGCGAGGATAGCGCCGCGAGGAATCTTGGCCCCTAGCTTCTCAAACT 93325 Query 9607 ATCTCTCAGGTTGCTTGAGAAA 9628 ||||||| || |||||||| Sbjct 93324 ---TCTCAGGCTGTTTGAGAAA 93306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975726165120