Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq203 316 2e-81
seq48 102 1e-16
>seq203
Length=54532
Score = 316 bits (350), Expect = 2e-81
Identities = 1134/1742 (65%), Gaps = 51/1742 (3%)
Strand=Plus/Plus
Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGC-GTACATATGCATAGAAGAGAGCTT 105654
|||||||| || |||||||| ||| | ||||| | ||| | ||||| |||| || |||
Sbjct 6113 TAGTACATGCCCGTCTTGAGACCTAGCTTCCAGCCAGTAAAG-TGCATGGAAGTGATCTT 6171
Query 105655 GGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACC 105714
| ||| || ||| | |||| || || | ||| |||||||||||| |||
Sbjct 6172 GCCCATGGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACC 6231
Query 105715 ACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCCACACTGTGCGGTAG 105772
||| | || ||||| | | ||| | || | || ||||||| || || ||||
Sbjct 6232 ACGGTCAGCAGCCATCTGCACGACGTG--TCGTTGAGAAATTTCCCAAACAGTTTTGTAG 6289
Query 105773 AGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACC 105832
||| |||||||| | ||||||| | ||| || ||||| ||||| | | | |
Sbjct 6290 AGAGCTTTGATATCGGCCGGGATATTGGGGATGTTCTGAATAGAACCGTTCTC---GGCA 6346
Query 105833 ATGA---GATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGA 105889
|||| ||| |||||| | | |||||||| || || | |||||| |||| ||
Sbjct 6347 ATGATACGATTCTTCATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGC 6406
Query 105890 TGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTG 105949
||||||| | || || || || ||| | | | | || ||||| | ||||
Sbjct 6407 CAGGGATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTG 6466
Query 105950 TAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGT 106009
|| || || ||||| ||||| ||||||| || || | ||| || || || ||||| ||
Sbjct 6467 TAAGGCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGG 6526
Query 106010 GCCATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCC 106067
|| | || || || ||| |||| || | |||||||| | |||||||| |||||
Sbjct 6527 GCGAGCAGCAATGA--GTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCC 6584
Query 106068 AGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGA 106125
| || || | || || ||||| | ||||||| || || ||||| | || | ||
Sbjct 6585 ACTCCCAGAGGTCAGAA-GGCTTCACGT-CCCACATGTCGAACTGAAGGATGCCCTCCGA 6642
Query 106126 CGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCG 106184
| |||||| |||| || || | |||| || || | | |||||||| | || |
Sbjct 6643 GGCGGGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAGAG-G 6701
Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244
| |||| || ||||| ||||| ||||| || | || | ||| |||||||
Sbjct 6702 CAGTGAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAG 6761
Query 106245 CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAAC 106304
||| || |||| ||| | || || | || |||||||| || || || | ||
Sbjct 6762 GTGACTCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACAC 6821
Query 106305 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGT 106364
||||||||| ||||||||| || ||||| || || ||||| || || |
Sbjct 6822 CAATAGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACAT 6881
Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424
|||||| || ||| || || ||| | || |||| || ||||| || | | |
Sbjct 6882 CAATGATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGT 6941
Query 106425 CAAAAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGC 106481
| | ||| ||| | | | ||| | || || || | || ||||| ||||
Sbjct 6942 CGTA---GCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGC 6998
Query 106482 AAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCT 106541
| ||||| |||||| | | |||||| | |||||| || || | |||||| ||
Sbjct 6999 ATACAGCGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGC 7058
Query 106542 TAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGT 106601
|| || ||||| ||||| || || |||||| |||| || ||||||||||||||||||
Sbjct 7059 GGATTGTTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGA 7118
Query 106602 AGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGT 106660
| || | |||||||| ||||| | | || || | | ||| | | || | ||| |
Sbjct 7119 AAGGATTACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGAGCTTCTG-GGCACG- 7176
Query 106661 ACAATGG-CGTTGGCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 106717
||||| || | || | ||||| ||| ||||| ||||| || |||||||||
Sbjct 7177 --AATGGTCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCC 7234
Query 106718 TCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACC 106776
|| || ||| | || || || || || || || || | |||| ||| | |||
Sbjct 7235 TCGCCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATCACC 7293
Query 106777 ACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT 106836
|| || || |||||||||||||| || |||||||| || | || | ||| |
Sbjct 7294 GTTCTTTTCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACG 7353
Query 106837 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 106896
| || | ||||| | ||| ||||| ||| || ||||||||||| | | ||| ||
Sbjct 7354 AGCTCGGACTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGC 7413
Query 106897 GTGCCATGGCT-CAAG---ATAG--ACTGCGATAGATCCCTTTCGACGCCCAGCTTGATT 106950
|||||| |||| |||| || | | ||| || || ||| | | ||| | || |
Sbjct 7414 GTGCCAAGGCTCCAAGTAAATGGCAAATGCACCAGGTCGCTT--GTTG-CCACCCTGGTC 7470
Query 106951 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 107010
||||| | || ||| ||| || || |||||||| ||||| | ||||| || ||
Sbjct 7471 AACATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCC 7530
Query 107011 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 107070
|| || || ||| ||| | |||| | | | |||| | || || |||||
Sbjct 7531 GTTGGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACC 7590
Query 107071 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 107130
|||||| ||| ||||| || || | | || || ||||||| || | |||
Sbjct 7591 ACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCT 7650
Query 107131 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 107190
||||||||| || | | ||||||||| |||| ||| | ||||| ||||| ||
Sbjct 7651 GTCCTCCTTCATGTCAACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTT 7710
Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCC 107248
|||||| || || | || || || | | | ||| |||||| | ||| || |||
Sbjct 7711 GAAGAGTGTGGGCGAGGCATG--TGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCC 7768
Query 107249 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGG 107308
| ||| ||||| | || || ||| |||| || |||||||||| ||||| ||||
Sbjct 7769 AGGACTCGCTCAATATTGTCTCCCCAGATACCGACAGCAACACGCATAATCATGTGTTGG 7828
Query 107309 GG 107310
||
Sbjct 7829 GG 7830
>seq48
Length=174106
Score = 102 bits (112), Expect = 1e-16
Identities = 183/262 (70%), Gaps = 8/262 (3%)
Strand=Plus/Minus
Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 9430
|||||| || || |||||||||| || || ||| ||| | ||| | | || ||
Sbjct 93563 GGCATCTATTTCGTCAATGAAGATGATGCAGGGTGCATTCTTGCGACCCTCGGCGAAAAG 93504
Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9489
||| || |||| | | || |||||||||||||| || || || | | || ||
Sbjct 93503 ATCTCGGACCCGTGAAGGACCAACACCAACAAACATTTCTACGAATTCGGAACCGCTTAC 93444
Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549
|| | ||| || ||| ||||||||| || ||||| ||| ||||| || || || |
Sbjct 93443 GCTGAA-GAACGGAACACCAGATTCACCTGCCGTGGCTTTGGCAAGAAGCGTTTTGCCAG 93385
Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 9606
||||||| |||||||||| || || || ||||||||||| || |||| |||| |
Sbjct 93384 TACCTGGAGGTCCCGCGAGGATAGCGCCGCGAGGAATCTTGGCCCCTAGCTTCTCAAACT 93325
Query 9607 ATCTCTCAGGTTGCTTGAGAAA 9628
||||||| || ||||||||
Sbjct 93324 ---TCTCAGGCTGTTTGAGAAA 93306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589975726165120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |