Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq303 167 5e-36
seq245 143 6e-29
>seq303
Length=27345
Score = 167 bits (184), Expect = 5e-36
Identities = 157/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
|||||| ||||| |||||||| || || || ||||||||||| || || | ||||||||
Sbjct 11474 AACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCATCTTC 11415
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||||| ||||| || || || || ||||| ||||| |||||||| || |||||
Sbjct 11414 CAGCTGCTTACCAGCGAAAATCAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTATCTTG 11355
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||| || || ||||| || ||||| || ||| ||||| || ||||| | |||||
Sbjct 11354 AATCTTGGTTTTCACGTTGTCGATGGTATCAGAAGACTCCACCTCGAGGGTGATGGTCTT 11295
Query 195111 TCCTGTCAAAGTTTTTACGA 195130
||| |||||||| || ||||
Sbjct 11294 TCCGGTCAAAGTCTTGACGA 11275
Score = 136 bits (150), Expect = 9e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||| ||||| || || || ||||| || ||||| || | ||||| ||||||||||| ||
Sbjct 11690 AGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGTGTCCGGCCATCCTCGAGCTGCTTTCC 11631
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
||||||||||| || || || || |||||||||||||| || |||||||| || ||
Sbjct 11630 AGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCTTCCTTATCTTGAATCTTCGTTTT 11571
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
|| || || || ||||| || ||||| || ||||| | ||||||||||| | ||
Sbjct 11570 CACATTGTCTATAGTGTCAGACGACTCCACCTCGAGGGTGATGGTCTTTCCTGTGAGGGT 11511
Query 195123 TTTTACGAACACTTGCAT 195140
|| ||||| | |||||
Sbjct 11510 CTTGACGAAGATCTGCAT 11493
>seq245
Length=42083
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||| ||| || || || ||||| ||||| || || | ||||| ||||||||
Sbjct 31856 GTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCGAGCTG 31797
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| ||||| || ||||| || |||||||| || ||||| || || ||
Sbjct 31796 CTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 31737
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || |||||||| ||| ||||| || ||||| | |||||| || ||
Sbjct 31736 GGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCCGT 31677
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 31676 GAGGGTCTTGACGAAAATCTGCAT 31653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109471819919696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |